Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G21
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   0.75 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.0  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   5.3  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 17/61 (27%), Positives = 22/61 (36%)
 Frame = +3

Query: 147 PCNAFGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECMDRC 326
           PC    G C +   D         KG   S +     C H+  +   TC+  G   M RC
Sbjct: 114 PCRN-NGSCVDRIADFECNCKNGWKGKTCSLKDS--HCDHTTCKNGGTCQDLGKTFMCRC 170

Query: 327 P 329
           P
Sbjct: 171 P 171


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 171 CTEAETDCPAGTHITAKGL 227
           C EAE   PAG H+  K +
Sbjct: 296 CQEAERLGPAGVHLRKKNI 314


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 261 NILRPYAVDLDKDLSQ*CEYQPDSPFQLRYT 169
           N+L  +    D DLS+  ++QP     +R+T
Sbjct: 445 NVLSTFWQQSDLDLSRGLDFQPRGSVFVRFT 475


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = +3

Query: 165 GKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKI 284
           GKCT+       G   T K  C   + +  E  H V + +
Sbjct: 49  GKCTKEAEKLKKGITETMKNGCVKCEQKQKEDVHKVFQHL 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,778
Number of Sequences: 336
Number of extensions: 2185
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)