Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G21
         (544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          27   0.16 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          25   0.66 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   0.66 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.1  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -2

Query: 162 RTH-YKVVRRKLMSLYWVLLPH 100
           R H Y V R+KL+ L W +LPH
Sbjct: 127 RPHTYLVTRQKLLELGWDVLPH 148


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -2

Query: 174 YTSRRTHYKVV-RRKLMSLYWVLLPH 100
           + + R H  +V R+KL+ L W +LPH
Sbjct: 122 HDNARPHTSLVTRQKLLELGWDVLPH 147


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -2

Query: 174 YTSRRTHYKVV-RRKLMSLYWVLLPH 100
           + + R H  +V R+KL+ L W +LPH
Sbjct: 244 HDNARPHTSLVTRQKLLELGWDVLPH 269


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 67  HTKNGRRKHIFINN 26
           HTKNGR K+   +N
Sbjct: 437 HTKNGRLKYQISDN 450


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/18 (38%), Positives = 8/18 (44%)
 Frame = +3

Query: 150 CNAFGGKCTEAETDCPAG 203
           CN     CT+   DC  G
Sbjct: 638 CNIMDAICTKLTADCQPG 655


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,448
Number of Sequences: 438
Number of extensions: 2458
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)