Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G20
(456 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847... 76 2e-14
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369... 75 4e-14
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86... 71 4e-13
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 52 2e-07
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 29 1.3
08_02_0318 + 15710834-15711775 29 1.3
03_05_0761 - 27515441-27515650,27515967-27516074,27516666-275168... 29 1.3
12_01_0560 - 4532398-4532724,4532975-4533235,4533670-4533855,453... 28 4.1
11_01_0768 - 6442332-6443792 28 4.1
09_06_0371 + 22615809-22617431,22618312-22618422,22619361-226194... 28 4.1
03_05_0390 - 23738892-23739392 28 4.1
02_01_0750 + 5574707-5576017 28 4.1
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 27 5.4
05_07_0157 - 28079181-28079720 27 5.4
08_02_1218 - 25359462-25359983 27 7.2
04_04_0189 + 23438794-23439053,23439178-23439400,23439947-23440819 27 7.2
10_08_0824 + 20821724-20822137,20822457-20822543,20822729-208228... 27 9.5
>03_05_0107 -
20883353-20883627,20883739-20883801,20884608-20884725,
20885012-20885023
Length = 155
Score = 75.8 bits (178), Expect = 2e-14
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +1
Query: 49 MSLQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDA 228
M LQE F++ A V+ L S+ D L LY L+KQAT GD + +RPG+ R +AK+DA
Sbjct: 1 MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVN-TSRPGIFAQRDRAKWDA 59
Query: 229 WHKKAGTSKEDAQKAYIAKVEGL 297
W G SKE+A YI KV+ L
Sbjct: 60 WKAVEGKSKEEAMSDYITKVKQL 82
>08_01_0417 -
3692247-3692329,3692442-3692504,3693233-3693350,
3694084-3694095
Length = 91
Score = 74.5 bits (175), Expect = 4e-14
Identities = 39/84 (46%), Positives = 51/84 (60%)
Frame = +1
Query: 49 MSLQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDA 228
M LQE F+Q A + L S+ + L LY L+KQAT GD + A RPG+ R +AK+DA
Sbjct: 1 MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTA-RPGIFAQRDRAKWDA 59
Query: 229 WHKKAGTSKEDAQKAYIAKVEGLV 300
W G SKE+A YI KV+ L+
Sbjct: 60 WKAVEGKSKEEAMSDYITKVKQLL 83
>06_01_0108 -
860080-860162,860276-860338,860857-860974,861481-861492
Length = 91
Score = 70.9 bits (166), Expect = 4e-13
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = +1
Query: 49 MSLQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDA 228
M LQE+F++ A + L S+ D L LY L+KQAT G RPG+ +L+ + K+DA
Sbjct: 1 MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVT-TGRPGIFNLKDRYKWDA 59
Query: 229 WHKKAGTSKEDAQKAYIAKVEGLV 300
W G SKE+A YI KV+ L+
Sbjct: 60 WKAVEGKSKEEAMADYITKVKQLL 83
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = +1
Query: 55 LQEQFDQA----AANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKF 222
L E F A AA+ + SVP + L +LY L+K AT G A +P L L+ +AK+
Sbjct: 90 LDEDFSAASAFVAASAASGTSVPEQAQL-QLYGLYKIATEGPC-TAPQPSALKLKARAKW 147
Query: 223 DAWHKKAGTSKEDAQKAYIAKVEGL 297
+AWHK E+A + YI V+ L
Sbjct: 148 NAWHKLGAMPTEEAMQKYITVVDEL 172
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 103 SVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWHKKAGTSK 255
+VPS SDL+++++ + A+ AN + K + DA AG K
Sbjct: 972 AVPSRSDLIKIFSQYGPVNEAKAETANNANCAQVIFKRRMDAEAAFAGAGK 1022
>08_02_0318 + 15710834-15711775
Length = 313
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 248 VPAFLCHASNLALPLK-SRRPGRLAGSASPDVACLNRAYSSSKSLSLGTDFRFLTLAA 78
+P H + L LP + PG+LA +A D C AY+++ ++L + L L+A
Sbjct: 153 LPFLSAHVAVLVLPAAVAPYPGQLAHAADVDARCAYPAYAAALLVALAALYAPLLLSA 210
>03_05_0761 -
27515441-27515650,27515967-27516074,27516666-27516839,
27517185-27517469,27517688-27517920,27519422-27520139
Length = 575
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 189 WSPRFEGQG*VRCVA*ESRHFKGRRPEGIHCEGRRSRP 302
++PR G R V ++ F+G+ + CEG RSRP
Sbjct: 198 FNPRLRGDWSGRPVIEQNTRFRGQWGPALRCEGWRSRP 235
>12_01_0560 -
4532398-4532724,4532975-4533235,4533670-4533855,
4533922-4533936,4533941-4534246,4535032-4535135,
4535669-4535801
Length = 443
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 304 CGRDLLPSQCMPSGRLPL 251
CGRD L C+P +LPL
Sbjct: 33 CGRDCLGDCCLPDSKLPL 50
>11_01_0768 - 6442332-6443792
Length = 486
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 76 AAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGL 195
+ A V +K VP D LL ++A F Q G A +RP L
Sbjct: 148 SGAGVNTVK-VPEDEWLLAIHASFSQLLRGPAGGVSRPPL 186
>09_06_0371 + 22615809-22617431,22618312-22618422,22619361-22619453,
22619562-22619661,22619754-22619834,22620774-22621047,
22621254-22622069,22622921-22623029,22623509-22623602,
22623881-22623939,22624150-22624197
Length = 1135
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 55 LQEQFDQAAANVRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFD 225
L + D A +R+L S+ DLL+ L K+ T+G+ + GL++ K++
Sbjct: 1041 LNYRIDMPDAEIRDLVSMKRWDDLLKSDQLTKELTNGNTFAGWKEGLINFPPTYKYE 1097
>03_05_0390 - 23738892-23739392
Length = 166
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
Frame = +3
Query: 282 EGRRSRPHRSGSNNN----SIYLLPT 347
E RRSR HRSG++ N YLLPT
Sbjct: 126 ERRRSRKHRSGTHTNRGRDKDYLLPT 151
>02_01_0750 + 5574707-5576017
Length = 436
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -2
Query: 335 IYRVIIGARSMRTRPSTFAMYAFWASSFEVPAFLCHASNLAL 210
I R+IIG RT ++ FW PAF+ H N AL
Sbjct: 26 IQRIIIGFLPGRTVLKFCSVCKFWRDCIVEPAFVDHHLNCAL 67
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 442 IRKILETN*LXSANSVFLTIYGSLYF*NSRDDVGNKYIELLLEP 311
IR ETN + +++LTI S+ F ++ G+K +++ LEP
Sbjct: 518 IRDQTETNLINLRRTIYLTIMSSVDF----EEAGHKLLKIKLEP 557
>05_07_0157 - 28079181-28079720
Length = 179
Score = 27.5 bits (58), Expect = 5.4
Identities = 23/63 (36%), Positives = 27/63 (42%)
Frame = -2
Query: 263 ASSFEVPAFLCHASNLALPLKSRRPGRLAGSASPDVACLNRAYSSSKSLSLGTDFRFLTL 84
A S +P F ++ A P R R G VAC + A SS K L LG LTL
Sbjct: 7 AVSSTLPLFHVRTASSA-PAALRFTTRGRGGGRHSVACNSTAASSPKVLELGDAIAGLTL 65
Query: 83 AAA 75
A
Sbjct: 66 EEA 68
>08_02_1218 - 25359462-25359983
Length = 173
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 346 RHLYYSRSIGTHRLLGRLSLPTITNLFLEFSV 441
RH++Y G RLLGR LP + F SV
Sbjct: 123 RHVFYRLRAGARRLLGRDGLPLSAHDFRYDSV 154
>04_04_0189 + 23438794-23439053,23439178-23439400,23439947-23440819
Length = 451
Score = 27.1 bits (57), Expect = 7.2
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +1
Query: 67 FDQAAAN---VRNLKSVPSDSDLLELYALFKQATSGDADPANRPGLLDLRGKAKFDAWHK 237
FD A+A+ V L+ + D+ + A ++ DAD A LDL A D WHK
Sbjct: 80 FDLASASPELVVGLRELYGVRDVFGVAAGYRGFYGPDADHAR----LDL---AAVDDWHK 132
Query: 238 KAGTSKEDAQKAYIAK--VEGLVRIDRAPIITLYIYYRRHL 354
K GT + + + V+G+V +T +Y ++
Sbjct: 133 KGGTVLKTTRGGFDLNKIVDGIVARGYTQCLTSNTFYHDYI 173
>10_08_0824 +
20821724-20822137,20822457-20822543,20822729-20822829,
20822917-20822967,20823616-20823790,20823878-20824192,
20824504-20824707,20824799-20825314,20825400-20825609,
20826092-20826280,20827254-20827405,20827685-20827837,
20827925-20828006,20828086-20828475
Length = 1012
Score = 26.6 bits (56), Expect = 9.5
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 324 YYWSPIDADETFYLRNVC 271
YYW+P+D D+T ++C
Sbjct: 779 YYWAPMDMDQTSNFWSMC 796
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,764,787
Number of Sequences: 37544
Number of extensions: 250201
Number of successful extensions: 607
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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