Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G19
(400 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g00460.1 68417.m00063 expressed protein contains Pfam profile... 30 0.65
At5g07500.1 68418.m00858 zinc finger (CCCH-type) family protein ... 29 0.86
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 27 3.5
At4g19530.1 68417.m02873 disease resistance protein (TIR-NBS-LRR... 27 4.6
At4g01350.1 68417.m00175 DC1 domain-containing protein contains ... 27 4.6
At5g55870.1 68418.m06964 hypothetical protein contains Pfam prof... 27 6.1
At5g54330.1 68418.m06766 hypothetical protein contains Pfam prof... 27 6.1
At5g47850.1 68418.m05912 protein kinase, putative contains simil... 27 6.1
At2g45900.1 68415.m05708 expressed protein 27 6.1
At4g26380.1 68417.m03795 DC1 domain-containing protein contains ... 26 8.0
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 26 8.0
At3g04970.2 68416.m00539 zinc finger (DHHC type) family protein ... 26 8.0
At3g04970.1 68416.m00540 zinc finger (DHHC type) family protein ... 26 8.0
At2g36900.1 68415.m04526 Golgi SNARE protein membrin 11 (MEMB11)... 26 8.0
>At4g00460.1 68417.m00063 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 473
Score = 29.9 bits (64), Expect = 0.65
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +1
Query: 10 FG*NIIIIRLHLSKISCF--EKNCCITNSVYNVYFTPNCVEITTTAGTPVHEGHFKPPTM 183
FG N+ + L K + + E NC ++ Y V F P C ++ A V E +
Sbjct: 146 FGQNLRLEPLETEKRALWKREMNCLLSVCDYIVEFIPRCQNLSNGATVEVMESRPRADIY 205
Query: 184 DELPFRRRLASAVRREPASVQH 249
LP R+L S + S Q+
Sbjct: 206 INLPALRKLDSMLMEALDSFQN 227
>At5g07500.1 68418.m00858 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 245
Score = 29.5 bits (63), Expect = 0.86
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 187 ELPFRRRLASAVRREPASVQHCSVARHSIRYWHIHCGES 303
E P+ R A RR+P +C+VA + R H G+S
Sbjct: 73 ECPYAHRGEKATRRDPRRYTYCAVACPAFRNGACHRGDS 111
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 27.5 bits (58), Expect = 3.5
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +1
Query: 91 VYNVYFTPNCVEITTTAGTPVH---EGHFKPPTMDELPFRRRLASAVRREPASVQHCS 255
+ NV PNC T A TPV E P+ + P + AV P V+H S
Sbjct: 112 ICNVPIDPNCDVSTPAASTPVSPPVESPTTSPSSAKSPAITPSSPAVSHSPPPVRHSS 169
>At4g19530.1 68417.m02873 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1167
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -2
Query: 255 RAVLYRRWFASYCACQAPPERQLVHRGRLEVPLMDRR 145
R + Y ++++S+C + P+ + G LE+PL + R
Sbjct: 587 RNLRYLKFYSSHCPQECTPKENIHIPGELELPLEEVR 623
>At4g01350.1 68417.m00175 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +1
Query: 19 NIIIIRLHLSKISCFEKNCCITNSVYN-----VYFTPNCVEITTTAGTPVHEGH 165
+++ ++ K+SC I Y+ VYF NC++++ P H H
Sbjct: 125 SLVFLKKREEKVSCELCKDSIAGPSYSCLECDVYFHVNCIQLSKEVNHPCHSAH 178
>At5g55870.1 68418.m06964 hypothetical protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 224
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 183 HRGRLEVPLMDRRTC 139
H GRL+V +M RRTC
Sbjct: 43 HLGRLDVMMMSRRTC 57
>At5g54330.1 68418.m06766 hypothetical protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 356
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 183 HRGRLEVPLMDRRTC 139
H GRL+V +M RRTC
Sbjct: 43 HLGRLDVMMMSRRTC 57
>At5g47850.1 68418.m05912 protein kinase, putative contains
similarity to cytokinin-regulated kinase 1 [Nicotiana
tabacum] gi|10998537|gb|AAG25966; contains protein
kinase domain, Pfam:PF00069
Length = 751
Score = 26.6 bits (56), Expect = 6.1
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -2
Query: 231 FASYCACQAPPERQLVHRGRLEVPLMDRRTCCCSNL 124
F S+C C+ +L +++P +++R C ++L
Sbjct: 387 FKSHCRCRVHDSGRLDDTRTIDIPKLEKRLCTLASL 422
>At2g45900.1 68415.m05708 expressed protein
Length = 720
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 112 PNCVEITTTAGTPVHEGHFKPPTMDEL----PFRRRLASAVRREPASVQHCS 255
PN +++ ++ GTP + K RRRL AV + P + QH S
Sbjct: 216 PNTLDVGSSPGTPSTDNKAKNEKFSSRFSLSRIRRRLKFAVGKNPCNAQHDS 267
>At4g26380.1 68417.m03795 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1016
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 151 VHEGHFKPPTMDELPFRRRLASAVRREPASV 243
VHE H P + P RRL SA + SV
Sbjct: 857 VHESHMHPLFLTSKPGERRLCSACKESYFSV 887
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 467
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 280 WHIHCGESVGINLPELLAAEVVGL 351
WH HC +V ++L L AA G+
Sbjct: 126 WHTHCTAAVDLSLDILAAARYFGV 149
>At3g04970.2 68416.m00539 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 316
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 184 DELPFRRRLASAVR-REPASVQHCSVARHSIRYWHIHCG 297
D++ + ++ S + +PA +HCS+ + + HCG
Sbjct: 153 DDIIYSKKECSTCKIPKPARSKHCSICNRCVARFDHHCG 191
>At3g04970.1 68416.m00540 zinc finger (DHHC type) family protein
similar to Golgi-specific DHHC zinc figer protein [Mus
musculus] GI:21728103; contains Pfam profile PF01529:
DHHC zinc finger domain
Length = 397
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 184 DELPFRRRLASAVR-REPASVQHCSVARHSIRYWHIHCG 297
D++ + ++ S + +PA +HCS+ + + HCG
Sbjct: 153 DDIIYSKKECSTCKIPKPARSKHCSICNRCVARFDHHCG 191
>At2g36900.1 68415.m04526 Golgi SNARE protein membrin 11 (MEMB11) /
Golgi SNAP receptor complex member 2-1 identical to
SP:Q9SJL6; identical to Probable 27 kDa Golgi SNARE
protein (Golgi SNAP receptor complex member 2)
(SP:Q9SJL6) [Arabidopsis thaliana]
Length = 225
Score = 26.2 bits (55), Expect = 8.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2
Query: 135 CSNLDTIWREINI 97
CSN+DT+WR I +
Sbjct: 61 CSNMDTLWRSIPV 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,856,493
Number of Sequences: 28952
Number of extensions: 146701
Number of successful extensions: 423
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 575830496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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