Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G18
         (461 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      66   2e-11
SB_55238| Best HMM Match : Serpin (HMM E-Value=0)                      65   3e-11
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      64   4e-11
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)                 31   0.61 
SB_18548| Best HMM Match : Peptidase_A17 (HMM E-Value=1.6e-18)         31   0.61 
SB_13046| Best HMM Match : La (HMM E-Value=5e-23)                      29   1.4  
SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)                28   3.3  
SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23)                     28   3.3  
SB_30536| Best HMM Match : fn3 (HMM E-Value=0.079)                     27   5.7  
SB_46978| Best HMM Match : Thr_dehydrat_C (HMM E-Value=5.9)            27   7.6  
SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.6  
SB_51780| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.6  
SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24)                 27   7.6  
SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   10.0 

>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
 Frame = +2

Query: 2   NSLTGLPRVLNSLSD--LRVEMNNLRE---RLVDVRLPKFTFEYTSRLNGVLRELGVRQA 166
           N + GL ++ +SL+   L+  M +LR      V+V LPKFT      L   L+ +G    
Sbjct: 235 NEVDGLGKLESSLNKETLQEAMTSLRNSHPEEVEVTLPKFTLTQEFSLGETLKGMGASDL 294

Query: 167 FE-GTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVL 343
           F  G A   G++   LV     +S V+    +EVNE G+IA AAT VGI+      + V 
Sbjct: 295 FSPGKADLSGISAAPLV-----VSEVVHKAFVEVNEEGTIAAAATGVGIMLMSMPMNPVF 349

Query: 344 YEVVADRPFMFFIQDEVTRQLLFTGRVSEP 433
           Y   A+ PF+F I+   T  +LF GR+  P
Sbjct: 350 Y---ANHPFLFLIRHNDTGAVLFMGRLVVP 376


>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 345

 Score = 64.9 bits (151), Expect = 3e-11
 Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
 Frame = +2

Query: 32  NSLSDLRVEMNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAF-EGTASFPGLARGQ 208
           + ++D+   +++ R   V+V +PKF      +LN  L+ELG+++ F +  A F G++   
Sbjct: 213 DKMTDIFNSVSSQRPADVEVYIPKFKMTSEFKLNEALQELGMKKMFDQAAADFTGIS--- 269

Query: 209 LVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQD 388
           L  E L +S VL    +EVNE G+ A AAT   ++ +     + L    AD PF+F IQ 
Sbjct: 270 LPPEHLFVSAVLHKAFVEVNEEGTEAAAATAAIMMMRCAIMREPLV-FRADHPFLFLIQH 328

Query: 389 EVTRQLLFTGRVSEP 433
             ++ +LF GRV  P
Sbjct: 329 CKSKCVLFMGRVMNP 343


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 64.5 bits (150), Expect = 4e-11
 Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
 Frame = +2

Query: 83  VDVRLPKFTFEYTSRLNGVLRELGVRQAFEGT-ASFPGL--ARGQLVREALRLSHVLQTC 253
           V+V +PKF       L  +L++LGV   F+   A   G+  A+G  V  A+  +H     
Sbjct: 234 VEVSIPKFRLSQKLELRSLLQDLGVSDIFDSRKADLSGISAAKGLYVSSAIHKAH----- 288

Query: 254 GIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVSEP 433
            IEVNE G++A A T V +  +  + ++V Y   AD PF+F I  + +  +LF G+V +P
Sbjct: 289 -IEVNERGTVAAATTGVVMAKRSLDMNEVFY---ADHPFLFSIHHKPSSAILFLGKVMQP 344

Query: 434 AIVG 445
             VG
Sbjct: 345 TRVG 348


>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
          Length = 1127

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
 Frame = -3

Query: 279  LPTSLTSMPHVCRTCDN---LSASRTSCPRANPGNEAVPSKACLTPNSLSTPFKRDVYSN 109
            L TS  S+P +  T ++   L+ S  S P     NE++PS   LT ++ S P      SN
Sbjct: 901  LTTSNESIPALTTTTESIPSLATSNESIPSLTTSNESIPS---LTTSNKSIP--PLTTSN 955

Query: 108  VNLGNLTSTRRSRKLFISTRRSLKLFRTRGKPVREL 1
             ++ +LT++  S     +   S+    T  + +  L
Sbjct: 956  ESISSLTTSNESIPSLTTRNESIPFLTTHNESIPSL 991



 Score = 28.3 bits (60), Expect = 3.3
 Identities = 25/108 (23%), Positives = 46/108 (42%)
 Frame = -3

Query: 324  PNLFTIPTCVAA*AMLPTSLTSMPHVCRTCDNLSASRTSCPRANPGNEAVPSKACLTPNS 145
            P+L T    + +      S++S+     +  +L+    S P     NE++PS   LT  +
Sbjct: 989  PSLTTSNESIPSLTTSNESISSLTTSNESIPSLTTRNESIPSLTTRNESIPS---LTTRN 1045

Query: 144  LSTPFKRDVYSNVNLGNLTSTRRSRKLFISTRRSLKLFRTRGKPVREL 1
             S PF     SN ++  LT++  S     ++  S+    T  + +  L
Sbjct: 1046 ESIPFL--TTSNESIPALTTSNESIPALTTSNESIPALTTSNESIPAL 1091


>SB_18548| Best HMM Match : Peptidase_A17 (HMM E-Value=1.6e-18)
          Length = 550

 Score = 30.7 bits (66), Expect = 0.61
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +2

Query: 218 EALRLSHVLQTCGIEVNEVGSIAYAATQVG--IVNKFGEDSDVLYEVVADRP 367
           E+  L  ++ T  I VN+   IA A   +   ++ +FGED +V  ++VADRP
Sbjct: 218 ESFSLDGLVTTSAIPVNK-SHIASAEEHLEGVLLQEFGEDLEVSRQIVADRP 268


>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
          Length = 442

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -3

Query: 210 SCPRANPGNEAVPSKACLTPNSL--STPFKRDVYSNVN-LGNLTSTRRSRKLFIS 55
           S P+A P   +VPS     PN +    P  + V    N L N  ST+  RK F S
Sbjct: 373 SAPKAKPAKPSVPSPTQTAPNKIPPDLPLIQGVVLRFNRLDNELSTKDVRKTFSS 427


>SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)
          Length = 639

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 369 SCSSSRTKSPGNCCSPGVSPNPQSSG 446
           S +SSRT+SP     P  SP+P +SG
Sbjct: 319 SLNSSRTESPVTIQEPSPSPSPGASG 344


>SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23)
          Length = 1105

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 234 DNLSASRTSCPRANPGNEAVPSKACLTPNSLSTP 133
           D  + +  +   A PGN   P+K  +T N+ STP
Sbjct: 379 DQATTTAATTSTAAPGNITTPTKGPITSNNTSTP 412


>SB_30536| Best HMM Match : fn3 (HMM E-Value=0.079)
          Length = 754

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 276 PTSLTSMPHVCRTCDNLSASRTS 208
           P  L  +P  CR+CD+LS  R S
Sbjct: 681 PLKLRRVPSPCRSCDSLSLHRES 703


>SB_46978| Best HMM Match : Thr_dehydrat_C (HMM E-Value=5.9)
          Length = 181

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +2

Query: 44  DLRVEMNNLRERLVDVRLPKFTFEY 118
           +L++ M+N+ ER++DV+   FT  +
Sbjct: 116 ELQISMDNVEERVIDVQYSTFTVNH 140


>SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 397

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = -3

Query: 279 LPTSLTSMPHVCRTCDNLSASRTS-CPRANPGNEAVPSKACLTPNSLSTPFKRDVYSNVN 103
           LP +  S+P + R  + +S  RTS C R N    A  S+A  T   L       + S   
Sbjct: 136 LPVATGSIPPISRIAELISRGRTSICSRGNGYWSAAVSRAMRT--GLFPNMHSGMLSVAG 193

Query: 102 LGNLTST 82
             NL ST
Sbjct: 194 TANLLST 200


>SB_51780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 641

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = -3

Query: 276 PTSLTSMPHVCRTCDNLSASRTSCPRANPGNEAVPSKACL-TPNSLSTPFKRDVYSNVNL 100
           P  + SM    RT   +SA  TS        E++PS +   TP+ L    K++     + 
Sbjct: 547 PVQVKSMSTKKRTASVVSA--TSNVSVTSLGESMPSSSRFRTPSPLPPIGKKESQREGSS 604

Query: 99  GNLTSTRRSRKLFISTRRS 43
           G+  S R SRK+ +   RS
Sbjct: 605 GSEESARSSRKVSVEVPRS 623


>SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24)
          Length = 346

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = -3

Query: 276 PTSLTSMPHVCRTCDNLSASRTSCPRANPGNEAVPSKACLTPNS 145
           P   T+ P  CR+C N + S     +    ++A+  K    P +
Sbjct: 51  PECGTNCPTACRSCKNENCSYIFAKKVKSNHDAIEKKGTTNPTN 94


>SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1459

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = -3

Query: 258 MPHVCRTCDNLSASRTSCPRANPGNEAVPSKACLTPNSLSTPFKRDVYSNVNLGNLTSTR 79
           MP++         ++ SC R    +  +P +  L+PN L    + D + + +L NL    
Sbjct: 724 MPNLNTPSHKTLMNKESCDRQGTHDLRIPRRPDLSPNPLMDDRRHDQHESHDLYNLPWPN 783

Query: 78  RSRK 67
             RK
Sbjct: 784 IPRK 787


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,702,584
Number of Sequences: 59808
Number of extensions: 260842
Number of successful extensions: 902
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 945255773
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)