Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G18
(461 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 57 5e-09
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 57 5e-09
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 54 7e-08
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 54 7e-08
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 51 4e-07
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 51 4e-07
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 51 4e-07
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 51 4e-07
U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein... 50 8e-07
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 50 8e-07
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 50 8e-07
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 48 4e-06
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 48 4e-06
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 43 9e-05
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 43 9e-05
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 31 0.30
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 31 0.30
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 29 1.6
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 29 1.6
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 29 1.6
U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosi... 28 2.8
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 27 4.9
AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical ... 27 4.9
U41263-7|AAC24431.1| 462|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF024500-4|AAB70365.1| 335|Caenorhabditis elegans Hypothetical ... 27 6.5
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 27 8.6
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 27 8.6
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 57.2 bits (132), Expect = 5e-09
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Frame = +2
Query: 14 GLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASF 187
GL L +L ++ ++N+ V+V++PK+ E L L+ LG+++AF+ A
Sbjct: 234 GLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADL 293
Query: 188 PGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVV-ADR 364
+A G L +S V IEV+E G+ A AAT V V K S + V AD
Sbjct: 294 GNMADG------LYVSKVTHKALIEVDEEGTTAAAATVVSFVRKSARPSAIKPIVFQADH 347
Query: 365 PFMFFIQDEVTRQLLFTG 418
PF+F + T +F G
Sbjct: 348 PFLFMLTQ--TNHPIFLG 363
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 57.2 bits (132), Expect = 5e-09
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Frame = +2
Query: 14 GLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASF 187
GL L +L ++ ++N+ V+V++PK+ E L L+ LG+++AF+ A
Sbjct: 234 GLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADL 293
Query: 188 PGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVV-ADR 364
+A G L +S V IEV+E G+ A AAT V V K S + V AD
Sbjct: 294 GNMADG------LYVSKVTHKALIEVDEEGTTAAAATVVSFVRKSARPSAIKPIVFQADH 347
Query: 365 PFMFFIQDEVTRQLLFTG 418
PF+F + T +F G
Sbjct: 348 PFLFMLTQ--TNHPIFLG 363
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 53.6 bits (123), Expect = 7e-08
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Frame = +2
Query: 14 GLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASF 187
GL L +L + ++ M+N LV++ +PK+ E LN L +G+ +AF +A
Sbjct: 243 GLSEALQNLDSVTIQQLMSNTSNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADL 302
Query: 188 PGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGI-VNKFGEDSDVLYEVVADR 364
A G + +S IEV+E G++A AAT + + ++ E AD
Sbjct: 303 SNFADG------IYISQAAHKALIEVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADH 356
Query: 365 PFMFFIQDE 391
PF+F + +
Sbjct: 357 PFLFILSKD 365
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 53.6 bits (123), Expect = 7e-08
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Frame = +2
Query: 14 GLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASF 187
GL L +L + ++ M+N LV++ +PK+ E LN L +G+ +AF +A
Sbjct: 243 GLSEALQNLDSVTIQQLMSNTSNTLVNIAMPKWKIETALGLNRALMAVGIEKAFTDSADL 302
Query: 188 PGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGI-VNKFGEDSDVLYEVVADR 364
A G + +S IEV+E G++A AAT + + ++ E AD
Sbjct: 303 SNFADG------IYISQAAHKALIEVDEDGTVAAAATTISFSLTSVFIPAEEPIEFTADH 356
Query: 365 PFMFFIQDE 391
PF+F + +
Sbjct: 357 PFLFILSKD 365
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 51.2 bits (117), Expect = 4e-07
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Frame = +2
Query: 14 GLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASF 187
GL L +L ++ ++N+ V+V++PK+ E L L+ LG+++AF+ A
Sbjct: 234 GLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADL 293
Query: 188 PGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRP 367
+A G L +S V IEV+E G++A AAT+ I + + E A+ P
Sbjct: 294 GNMADG------LYVSKVTHKALIEVDEDGTVAVAATRCSI-ERCRKKMKENIEFHAEHP 346
Query: 368 FMFFIQDEVTRQLL--FTG 418
F F + + L FTG
Sbjct: 347 FFFILHHGTSYIFLGVFTG 365
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 51.2 bits (117), Expect = 4e-07
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Frame = +2
Query: 14 GLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASF 187
GL L +L ++ ++N+ V+V++PK+ E L L+ LG+++AF+ A
Sbjct: 234 GLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADL 293
Query: 188 PGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRP 367
+A G L +S V IEV+E G++A AAT+ I + + E A+ P
Sbjct: 294 GNMADG------LYVSKVTHKALIEVDEDGTVAVAATRCSI-ERCRKKMKENIEFHAEHP 346
Query: 368 FMFFIQDEVTRQLL--FTG 418
F F + + L FTG
Sbjct: 347 FFFILHHGTSYIFLGVFTG 365
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 51.2 bits (117), Expect = 4e-07
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Frame = +2
Query: 17 LPRVLNSLSDLRVEMNNLR---------ERLVDVRLPKFTFEYTSRLNGVLRELGVRQAF 169
LP++ NSL + ++N R ++ +LPKFT E L L+ LG+ F
Sbjct: 225 LPKLRNSLKEALKKLNEKRFNDLLKTKKRTFMNTQLPKFTIEKDLNLKSHLQTLGITDIF 284
Query: 170 EGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYE 349
+A GLA E L++S + IEVNE G+ A A T + V +
Sbjct: 285 SDSADLSGLA------ENLKISEGVHKAIIEVNEEGTTAAAVTMMKAV-PMSARMEQPVN 337
Query: 350 VVADRPFMFFI 382
+AD PF F I
Sbjct: 338 FIADHPFFFTI 348
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 51.2 bits (117), Expect = 4e-07
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 9/131 (6%)
Frame = +2
Query: 17 LPRVLNSLSDLRVEMNNLR---------ERLVDVRLPKFTFEYTSRLNGVLRELGVRQAF 169
LP++ NSL + ++N R ++ +LPKFT E L L+ LG+ F
Sbjct: 225 LPKLRNSLKEALKKLNEKRFNDLLKTKKRTFMNTQLPKFTIEKDLNLKSHLQTLGITDIF 284
Query: 170 EGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYE 349
+A GLA E L++S + IEVNE G+ A A T + V +
Sbjct: 285 SDSADLSGLA------ENLKISEGVHKAIIEVNEEGTTAAAVTMMKAV-PMSARMEQPVN 337
Query: 350 VVADRPFMFFI 382
+AD PF F I
Sbjct: 338 FIADHPFFFTI 348
>U97008-18|AAB52317.2| 115|Caenorhabditis elegans Serpin protein 5
protein.
Length = 115
Score = 50.0 bits (114), Expect = 8e-07
Identities = 32/111 (28%), Positives = 53/111 (47%)
Frame = +2
Query: 59 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 238
M+N LV++ +PK+ E LN L +G+ +AF +A A G + +S
Sbjct: 1 MSNTSNTLVNIAMPKWKIETALGLNRGLMAVGIEKAFTDSADLSNFADG------IYISQ 54
Query: 239 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDE 391
IEV+E G++A AAT + + ++ E AD PF+F + +
Sbjct: 55 AAHKALIEVDEDGTVAAAATTISSSVGSVQRTEKPIEFTADHPFLFILSKD 105
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 50.0 bits (114), Expect = 8e-07
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 14 GLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASF 187
GL L +L ++ ++N+ V+V++PK+ E L L+ LG+++AF+ A
Sbjct: 234 GLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADL 293
Query: 188 PGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGE-DSDVLYEVVADR 364
+A G L +S V IEV+E G+ A AAT V I K + + AD
Sbjct: 294 GNMADG------LYVSKVTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEEPKDFTADH 347
Query: 365 PFMFFIQDE 391
PF F + +
Sbjct: 348 PFFFVLSKD 356
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 50.0 bits (114), Expect = 8e-07
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 14 GLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASF 187
GL L +L ++ ++N+ V+V++PK+ E L L+ LG+++AF+ A
Sbjct: 234 GLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKAFDNDADL 293
Query: 188 PGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVGIVNKFGE-DSDVLYEVVADR 364
+A G L +S V IEV+E G+ A AAT V I K + + AD
Sbjct: 294 GNMADG------LYVSKVTHKALIEVDEEGTKAAAATTVSISLKSAMFVMEEPKDFTADH 347
Query: 365 PFMFFIQDE 391
PF F + +
Sbjct: 348 PFFFVLSKD 356
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 47.6 bits (108), Expect = 4e-06
Identities = 31/108 (28%), Positives = 51/108 (47%)
Frame = +2
Query: 59 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 238
+NN+ + + + PKF +Y L L + G+ + F A G+ G L+L+
Sbjct: 253 INNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPG------LQLAS 306
Query: 239 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFI 382
IEV++VG+ A AAT+ I + L+ + D PF+F I
Sbjct: 307 ATHQALIEVDQVGTRAAAATEAKIFFTSASSDEPLH-IRVDHPFLFAI 353
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 47.6 bits (108), Expect = 4e-06
Identities = 31/108 (28%), Positives = 51/108 (47%)
Frame = +2
Query: 59 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 238
+NN+ + + + PKF +Y L L + G+ + F A G+ G L+L+
Sbjct: 253 INNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPG------LQLAS 306
Query: 239 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFI 382
IEV++VG+ A AAT+ I + L+ + D PF+F I
Sbjct: 307 ATHQALIEVDQVGTRAAAATEAKIFFTSASSDEPLH-IRVDHPFLFAI 353
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 43.2 bits (97), Expect = 9e-05
Identities = 34/120 (28%), Positives = 58/120 (48%)
Frame = +2
Query: 59 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 238
+N+L+ V V++PKF E L L +G+++ F A G+A + + +S
Sbjct: 246 LNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGIA------DKVFISS 299
Query: 239 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTG 418
+ IEV+E G+ A AA+ + + ++ + VAD PF+F + E LF G
Sbjct: 300 GIHKAIIEVDEDGTTAAAASAFKVQLEMMIMAEPT-QFVADHPFLFAVLFE--NHTLFLG 356
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 43.2 bits (97), Expect = 9e-05
Identities = 34/120 (28%), Positives = 58/120 (48%)
Frame = +2
Query: 59 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 238
+N+L+ V V++PKF E L L +G+++ F A G+A + + +S
Sbjct: 246 LNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGIA------DKVFISS 299
Query: 239 VLQTCGIEVNEVGSIAYAATQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTG 418
+ IEV+E G+ A AA+ + + ++ + VAD PF+F + E LF G
Sbjct: 300 GIHKAIIEVDEDGTTAAAASAFKVQLEMMIMAEPT-QFVADHPFLFAVLFE--NHTLFLG 356
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 31.5 bits (68), Expect = 0.30
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 318 SLEKIPTSSTRWWPIDRSCSSSRTKSPGNC 407
S++K+ +S +W PI++ CSS + K +C
Sbjct: 399 SVQKLVSSFVKWSPIEKECSSCKHKISSSC 428
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 31.5 bits (68), Expect = 0.30
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 318 SLEKIPTSSTRWWPIDRSCSSSRTKSPGNC 407
S++K+ +S +W PI++ CSS + K +C
Sbjct: 399 SVQKLVSSFVKWSPIEKECSSCKHKISSSC 428
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 427 GDTPGEQQLPGDFVLDEEHERSIG-HHLVEDVGIFSKLIYDTNLCCCISYAANFIDFNAT 251
G+ G+ + G VL + E+ I ++ D +FS++ DTN C + A + F
Sbjct: 919 GEVIGKGETGGFEVLSNKAEQDITVEEVLNDPTLFSEIETDTNSCEVVKTAETYERFTTI 978
Query: 250 C 248
C
Sbjct: 979 C 979
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 427 GDTPGEQQLPGDFVLDEEHERSIG-HHLVEDVGIFSKLIYDTNLCCCISYAANFIDFNAT 251
G+ G+ + G VL + E+ I ++ D +FS++ DTN C + A + F
Sbjct: 822 GEVIGKGETGGFEVLSNKAEQDITVEEVLNDPTLFSEIETDTNSCEVVKTAETYERFTTI 881
Query: 250 C 248
C
Sbjct: 882 C 882
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 29.1 bits (62), Expect = 1.6
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 427 GDTPGEQQLPGDFVLDEEHERSIG-HHLVEDVGIFSKLIYDTNLCCCISYAANFIDFNAT 251
G+ G+ + G VL + E+ I ++ D +FS++ DTN C + A + F
Sbjct: 833 GEVIGKGETGGFEVLSNKAEQDITVEEVLNDPTLFSEIETDTNSCEVVKTAETYERFTTI 892
Query: 250 C 248
C
Sbjct: 893 C 893
>U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosis
protein familyprotein 1 protein.
Length = 459
Score = 28.3 bits (60), Expect = 2.8
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 254 GIEVNEVGSIA-YAATQVGI--VNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRV 424
G E + GS A Y +QV I V + +++DV++E + PF FI E + +
Sbjct: 8 GSEAADTGSEASYKVSQVEIEDVEENLKNADVIFEHLEQLPFQVFILSEFGKPIFVNNDR 67
Query: 425 SEPAIV 442
+E IV
Sbjct: 68 NEGEIV 73
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 27.5 bits (58), Expect = 4.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 242 LQTCGIEVNEVGSIAYAATQVGIV 313
L++CG +N G++ + TQVG +
Sbjct: 322 LESCGFSINRDGTVEFKWTQVGCI 345
>AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical
protein T01A4.3 protein.
Length = 710
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +2
Query: 296 TQVGIVNKFGEDSDVLYEVVADRPFMFFIQDEVTRQLLFTGRVSE 430
T +G+ +FG D +L+ D P + + ++ R + GR+++
Sbjct: 374 TLMGLAQRFGFDYLILWAARIDNPTLTLTKTDIKRSKISKGRLNQ 418
>U41263-7|AAC24431.1| 462|Caenorhabditis elegans Hypothetical
protein T19D12.9 protein.
Length = 462
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 379 EEHERSIGHHLVEDVGIFSKLIYDTNLCCCISYAANFIDFNATCLQDV 236
EE + + D F LI CC + N I+F+ C+QDV
Sbjct: 5 EEQQTNQKRFTFADKTRFIVLIIGLCCICCTNANYNAINFSVICMQDV 52
>AF024500-4|AAB70365.1| 335|Caenorhabditis elegans Hypothetical
protein K06H6.6 protein.
Length = 335
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 359 DRPFMFFIQDEVTRQLLFTGRVSEPAIVG 445
+R FFI+DE+ R+++ + + + P +VG
Sbjct: 75 NRTATFFIEDEIYRRMIESSKEAIPGLVG 103
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resistance
protein familyprotein 1, isoform e protein.
Length = 1534
Score = 26.6 bits (56), Expect = 8.6
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +2
Query: 134 GVLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVG-I 310
G+ LG+ QA A+ +A G + A RL H I + + + T +G I
Sbjct: 1019 GIYAVLGMGQATSVCAASIIMALGMVC--ASRLLHATLLENIMRSPMAF--FDVTPLGRI 1074
Query: 311 VNKFGEDSDVLYEVVADRPFMFFIQ-DEVTRQLLFTGRVSEPAI 439
+N+FG+D DV+ E + D F + E+ ++FT + AI
Sbjct: 1075 LNRFGKDMDVVDERLPDNIGDFLLTFSELVACVVFTSYATPFAI 1118
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 26.6 bits (56), Expect = 8.6
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +2
Query: 134 GVLRELGVRQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQVG-I 310
G+ LG+ QA A+ +A G + A RL H I + + + T +G I
Sbjct: 1019 GIYAVLGMGQATSVCAASIIMALGMVC--ASRLLHATLLENIMRSPMAF--FDVTPLGRI 1074
Query: 311 VNKFGEDSDVLYEVVADRPFMFFIQ-DEVTRQLLFTGRVSEPAI 439
+N+FG+D DV+ E + D F + E+ ++FT + AI
Sbjct: 1075 LNRFGKDMDVVDERLPDNIGDFLLTFSELVACVVFTSYATPFAI 1118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,973,462
Number of Sequences: 27780
Number of extensions: 196650
Number of successful extensions: 705
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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