Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G17
(569 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 55 4e-08
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 48 3e-06
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 46 2e-05
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 46 2e-05
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 41 5e-04
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 38 0.005
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 35 0.044
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 33 0.10
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 32 0.23
At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family pro... 30 1.2
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 29 2.9
At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger) fa... 28 3.8
At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II... 28 3.8
At3g26920.1 68416.m03368 F-box family protein contains F-box dom... 28 3.8
At4g15075.1 68417.m02316 hypothetical protein 28 5.0
At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 28 5.0
At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger) fa... 28 5.0
At1g13540.1 68414.m01587 expressed protein 28 5.0
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 27 6.7
At5g50990.1 68418.m06322 pentatricopeptide (PPR) repeat-containi... 27 6.7
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 27 6.7
At3g27220.1 68416.m03403 kelch repeat-containing protein contain... 27 6.7
At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) fa... 27 6.7
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 27 6.7
At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein ... 27 8.8
At4g11410.1 68417.m01839 short-chain dehydrogenase/reductase (SD... 27 8.8
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 54.8 bits (126), Expect = 4e-08
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +1
Query: 184 TDLEPALSFCTHLLYKSAGIQAPPYQMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVF 360
TD++ +L THL A ++A Y++ N A + A T ++++ P ++
Sbjct: 21 TDIDSSLF--THLFCTFADLEAESYEITIATWN------QAPFHAFTETVQQRNPHVKTL 72
Query: 361 LTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRK 522
L++GG + +D + + +P +R +F S + +A YGF G+DL W+ P+ +
Sbjct: 73 LSIGGGNADKDA--FASMASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNE 124
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 48.4 bits (110), Expect = 3e-06
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 328 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 507
++R+ P ++ L++GG D Y + +P +R +F +S++ +A YGF G+DL W+
Sbjct: 83 VQRRNPSVKTLLSIGGG--IADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWE 140
Query: 508 LP 513
P
Sbjct: 141 YP 142
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +1
Query: 205 SFCTHLLYKSAGIQAPPYQMVSLNENLDIDRAHANYRAITN-LKRQFPQLRVFLTVGGDD 381
S THL A I YQ++ + N + T ++R+ P ++ L++GGD
Sbjct: 45 SLFTHLFCAFADINTLTYQVIVSSRN------KPKFSTFTQTVRRRNPTVKTLLSIGGDF 98
Query: 382 DTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 513
+ + +P +R F +S++ LA GF G+DL+W+ P
Sbjct: 99 TYNFA--FASMASNPTSRKLFISSSIKLARSCGFHGLDLNWKYP 140
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +1
Query: 328 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 507
+K++ P ++ L++GG + D + + +P +R +F SA+ A Y FDG+DL W+
Sbjct: 72 VKKKNPHVQTLLSIGGRN--ADKSAFASMASNPTSRKSFIWSAISSARYYRFDGLDLVWK 129
Query: 508 LPK 516
PK
Sbjct: 130 YPK 132
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 41.1 bits (92), Expect = 5e-04
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Frame = +1
Query: 103 SPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQAPPYQMVSLNEN 282
SPS++ K ++ E+Q + + P+ F THL A + A +++
Sbjct: 9 SPSAEVKASYWFPDG----ETQDPITSAETIPSALF-THLFCAFADLDANSHKVF----- 58
Query: 283 LDIDRAHAN-YRAITN-LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSA 456
+ +AH + T +K + PQ++ L++GG + + + + Q+R F +S
Sbjct: 59 --VSQAHEFIFSTFTETVKIRNPQVKTLLSIGGKNANNSA--FASMASNHQSRKTFIDSW 114
Query: 457 LLLAEQYGFDGIDLSWQLP 513
+ +A GF G+DL+W+ P
Sbjct: 115 IFIARSNGFHGLDLAWEYP 133
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 412 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 516
+ S R +F S + +A YGFDG+DL W+ P+
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPR 35
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 34.7 bits (76), Expect = 0.044
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Frame = +1
Query: 139 DSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQAPPYQMVSLNENLDIDRAHANYRA 318
D KS E ++ P+ + F THL A + + +++ N + +
Sbjct: 22 DGKSQSPECLSQGTPSSFIDSTLF-THLFCAFADVDSSTHEVTISAAN------SYQFSS 74
Query: 319 ITN-LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGID 495
T +K + ++ L++GG D D + + + R AF +S++ +A + F G+D
Sbjct: 75 FTETVKEKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLD 132
Query: 496 LSWQLP 513
L+W+ P
Sbjct: 133 LAWEYP 138
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +1
Query: 328 LKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 507
+K + ++ L++GG D D + + + R AF +S++ +A + F G+DL+W+
Sbjct: 71 VKDKNTDVQTLLSIGGKD--ADKAVLASMASNSKNRKAFIDSSIDIARKKDFYGLDLAWE 128
Query: 508 LP 513
P
Sbjct: 129 YP 130
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 32.3 bits (70), Expect = 0.23
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 412 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 513
++ + +R +F +S++ +A GF G+DL+W+ P
Sbjct: 79 IVSNRTSRESFISSSISIARSLGFYGLDLAWEYP 112
>At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family
protein
Length = 420
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 478 GFDGIDLSWQLPKRKPKKIRSSI 546
GF GI ++W L K PK++R S+
Sbjct: 30 GFAGISVAWHLLKESPKELRLSV 52
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 206 RSAPICCTNLPASKLHHIKWFHSM 277
RS PIC T P+S H KW H +
Sbjct: 13 RSCPICATPFPSSSSSH-KWTHQV 35
>At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 525
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 181 PTDLEPALSFCTHLLYKSAG 240
PTD P+LSFC +Y S G
Sbjct: 321 PTDPNPSLSFCPSNIYSSTG 340
>At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II
(IP5PII) nearly identical to inositol polyphosphate
5-phosphatase II [Arabidopsis thaliana] GI:10444263
isoform contains an AT-acceptor splice site at intron 6
Length = 613
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 412 LLESPQARTAFTNSALLLAEQYGFDGIDLSW-QLPKRKPKKIRSSIG 549
L E+P + F + A L F+ ++LSW + + KIR+S G
Sbjct: 292 LPENPSGASRFASEARQLKRSRSFETLNLSWNDIKEEDGDKIRNSYG 338
>At3g26920.1 68416.m03368 F-box family protein contains F-box domain
Pfam:PF00646
Length = 565
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 569 LMLCQKDPILERIFFGFLFGNCQ 501
L+L K P LE + GF FG C+
Sbjct: 336 LLLSNKAPFLESLHLGFRFGECR 358
>At4g15075.1 68417.m02316 hypothetical protein
Length = 168
Score = 27.9 bits (59), Expect = 5.0
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 164 LKHVCCLRTWSLLFRSAP 217
L++ CCL+T ++LF+S P
Sbjct: 126 LRNACCLKTATILFKSTP 143
>At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 401
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 101 HHLVAKAKSSATMTARAISEN-LKHVCCLRTWSLLFRSAPICCTNLPASKL 250
H V K +AR + N + H C+ W + S P+C LPA L
Sbjct: 200 HCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDL 250
>At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 423
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +2
Query: 170 HVCCLRTWSLLFRSAPICCTNLPAS-KLHH 256
HV C+ TW L + P+C +NL + HH
Sbjct: 150 HVECIDTWLLSHSTCPLCRSNLLSGFSSHH 179
>At1g13540.1 68414.m01587 expressed protein
Length = 381
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 346 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAF 444
+L V +GGDD T DP + +L+ P + +
Sbjct: 65 KLAVTFNIGGDDSTRDPVVFIPVLDKPLSSNCY 97
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 170 HVCCLRTWSLLFRSAPICCTNLPAS 244
HV C+ W L S P+C LP+S
Sbjct: 282 HVRCIVPWLELHSSCPVCRFELPSS 306
>At5g50990.1 68418.m06322 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 511
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 203 FRSAPICCTNLPASKLHHIKWFHSMRIWTLIGRTLIIERSQT*KDSFLNCA-CS*QWEVM 379
F S+ C L LHH KW HS+ I + I I+ S D + C EV
Sbjct: 145 FASSLAACARL--GDLHHAKWVHSLMIDSGIELNAIL--SSALVDVYAKCGDIGTSREVF 200
Query: 380 TTLKIHRSTIFYWN 421
++K R+ + WN
Sbjct: 201 YSVK--RNDVSIWN 212
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 SPSPGYWR*RLRLPTTQHHLV-AKAKSSATMTARAISENLKHVCCLRTWSLLFRSAPICC 226
SP+ G W + ++P+ H L+ S T+ ARA ++ + LL + C
Sbjct: 578 SPAAGMWFSKFKIPSPGHILIYGPPGSGKTILARAAAKYFE-----EQKDLLAHVILVSC 632
Query: 227 TNLPASKLHHI 259
+ L K+ HI
Sbjct: 633 STLALEKVQHI 643
>At3g27220.1 68416.m03403 kelch repeat-containing protein contains
Pfam PF01344: Kelch motif (4 repeats); contains Prosite
PS00334: Myb DNA-binding domain repeat signature 2;
similar to Male enhanced Antigen-1 (peas) (GI:20513270)
[Mus musculus]
Length = 426
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 445 TNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWH 561
T +L+ E + F L+W + R P ++++++ FW+
Sbjct: 355 TKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWN 393
>At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 214
Score = 27.5 bits (58), Expect = 6.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 170 HVCCLRTWSLLFRSAPIC 223
H+CCL W L S P+C
Sbjct: 162 HLCCLDAWLKLNGSCPVC 179
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = +1
Query: 220 LLYKSAGIQAPPYQMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQ 399
LL+ +A A Y + + L ID A +++ Q P LR + VG +
Sbjct: 547 LLFSTASCSARLYTGTPI-QLLVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMV 605
Query: 400 KYNLLLESPQARTAFTNSALLLAEQY 477
+ + LE+ R+ F ALL ++Y
Sbjct: 606 ESQIALEAGFGRSLFERLALLGHKKY 631
>At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 381
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 398 CGSSVSSSPPTVKNTRN*GNCLF 330
CG S SSSP +V + +N CLF
Sbjct: 177 CGGSPSSSPASVLSNKNNRCCLF 199
>At4g11410.1 68417.m01839 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
Short-chain dehydrogenase/reductase (SDR) superfamily
Length = 317
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 199 ALSFCTHLLYKSAGIQAPPYQMVSLNENLDIDRAHANYRAITNL 330
+L +LL +AGI A P+ + S N L H + +TNL
Sbjct: 104 SLDLPLNLLINNAGIMACPFLLSSDNIELQFATNHLGHFLLTNL 147
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,509,268
Number of Sequences: 28952
Number of extensions: 225961
Number of successful extensions: 718
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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