Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G16
         (573 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81120-2|CAB03344.2|  426|Caenorhabditis elegans Hypothetical pr...    32   0.33 
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p...    28   4.1  
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p...    28   4.1  
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p...    28   4.1  
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr...    28   4.1  
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.     28   4.1  
AF036702-7|AAB88372.1|  360|Caenorhabditis elegans Hypothetical ...    28   4.1  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    27   9.5  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      27   9.5  
AF016685-10|AAG24143.2|  195|Caenorhabditis elegans Hypothetical...    27   9.5  

>Z81120-2|CAB03344.2|  426|Caenorhabditis elegans Hypothetical
           protein T12D8.4 protein.
          Length = 426

 Score = 31.9 bits (69), Expect = 0.33
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = +1

Query: 148 ADVQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPD 327
           A +  VP  YT+  ++ S   G    +  + K   ++     + +R+   +VG   ++ D
Sbjct: 98  AGIHQVPFSYTLPKSLPSSFEGEFGHIRYTCKAICERPWDFDIVSRKAFTVVGIEDINSD 157

Query: 328 DTFSQPLNCGEPNNAVT 378
              ++P  C E N+AVT
Sbjct: 158 PKLNEPATCVESNHAVT 174


>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
            protein ZK617.1c protein.
          Length = 6629

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 175  YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 1928 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1978


>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
            protein ZK617.1b protein.
          Length = 7158

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 175  YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 2457 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2507


>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
            protein ZK617.1a protein.
          Length = 6839

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 175  YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 2138 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2188


>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
            ZK617.1c protein.
          Length = 6629

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 175  YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 1928 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1978


>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
            ZK617.1b protein.
          Length = 7158

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 175  YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 2457 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2507


>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
            ZK617.1a protein.
          Length = 6839

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 175  YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 2138 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 2188


>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
          Length = 6048

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 175  YTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQGDKIVGTWTVSPDD 330
            YT+T   +S    HS++V++ GK P   +  + +     D+    W V  DD
Sbjct: 1347 YTLTATNASGSDKHSVEVIVLGK-PSSPLGPLEVSNVYEDRADLEWKVPEDD 1397


>AF036702-7|AAB88372.1|  360|Caenorhabditis elegans Hypothetical
           protein F33D4.4 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 102 GGVSAGKRHHRCNCYYVSEHHLFYKFQ 22
           GG+  G   H C  ++VSEH++F K Q
Sbjct: 215 GGLVLGMGLHPCAGHFVSEHYVFKKDQ 241


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -1

Query: 270  DAGHFVFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
            D    VF C A+++++NG+ S  R  + +D  +R+  C+++ S
Sbjct: 4000 DCDKSVFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4042


>AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical
           protein Y55B1AL.3a protein.
          Length = 923

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 440 RT*KATLCSRSPLSRATPSSGSESNQPPVXVLS 538
           RT +  +C     S  +PSS +E+  PPV V S
Sbjct: 32  RTSREYVCPLKSTSPQSPSSSTENEPPPVSVTS 64


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -1

Query: 255  VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
            VF C A+++++NG+ S  R  + +D  +R+  C+++ S
Sbjct: 3997 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4034


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -1

Query: 255  VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
            VF C A+++++NG+ S  R  + +D  +R+  C+++ S
Sbjct: 4008 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4045


>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +1

Query: 388 HAKELDRQTVSYPWTAPKDLEGDVVFKVTIVKSYAVFWVGIE 513
           HA    + +V   W AP+   G VVF+ +++++  +++   E
Sbjct: 125 HANLKSKTSVHMMWKAPEVSSGCVVFRASVIETKYIWFTEAE 166


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = -1

Query: 255  VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 145
            VF C A+++++NG+ S  R  + +D  +R+  C+++ S
Sbjct: 4008 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4045


>AF016685-10|AAG24143.2|  195|Caenorhabditis elegans Hypothetical
           protein F59E11.7a protein.
          Length = 195

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 12  DDLPEIYRKDDVHLRSSSCIG 74
           DD+   Y K+  +LRSS CIG
Sbjct: 170 DDMTRRYEKEAANLRSSICIG 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,351,689
Number of Sequences: 27780
Number of extensions: 325389
Number of successful extensions: 851
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)