Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G13
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 46 2e-05
AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical... 45 3e-05
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical p... 33 0.19
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical pr... 33 0.19
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.58
U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z78412-8|CAB01653.1| 400|Caenorhabditis elegans Hypothetical pr... 29 3.1
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 29 3.1
L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homo... 29 3.1
AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical ... 29 3.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 4.1
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 28 4.1
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical pr... 28 5.4
AL024499-5|CAC42318.1| 562|Caenorhabditis elegans Hypothetical ... 28 5.4
AL024499-4|CAC42317.1| 617|Caenorhabditis elegans Hypothetical ... 28 5.4
AL024499-3|CAA19707.1| 618|Caenorhabditis elegans Hypothetical ... 28 5.4
AF031840-1|AAC13676.1| 562|Caenorhabditis elegans GLY6c protein. 28 5.4
AF031839-1|AAC13675.1| 617|Caenorhabditis elegans GLY6b protein. 28 5.4
AF031838-1|AAC13674.1| 618|Caenorhabditis elegans GLY6a protein. 28 5.4
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 27 7.1
AC084155-1|AAG23361.2| 352|Caenorhabditis elegans Hypothetical ... 27 7.1
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 27 9.4
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 246 EGGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCT---GDKYPIL 398
+G W SY+D ++ NK +YVK + GG + L DDF C+ G YP++
Sbjct: 363 QGNQWWSYDDEESFANKMAYVKREGYGGAFVWTLDFDDFNAGCSNSNGQLYPLI 416
>AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical
protein Y22D7AL.14 protein.
Length = 264
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 243 GEGGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYPIL 398
G+ G WVSYE+ + K ++ + +GGV + + DD G C YP+L
Sbjct: 204 GDDGIWVSYENQQSILAKMAFARKLQVGGVMVFSIGSDDVTGKCGHGPYPLL 255
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical protein
C25A8.4 protein.
Length = 1067
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +3
Query: 294 KASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYPILRA 404
K Y++ + LGG+++ +++ DD+ G+C +PIL++
Sbjct: 1024 KIGYIQREQLGGIAL-NVNGDDYTGICGRGSFPILKS 1059
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 261 VSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCTG-DKYPILRA 404
V+YE+ +A KA + + +GG+++ ++ DD +C +PIL A
Sbjct: 671 VAYENTRSAHIKAVWASMEGVGGLALHNMHQDDPSAVCDNRTAFPILNA 719
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRG 368
+V YE+ ++ +K Y+ N+GGV I + DD +G
Sbjct: 344 FVGYENAESLKHKVDYIVENNIGGVMIWAIDFDDDQG 380
>Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 252 GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
G ++++E ++ K YVK + LGGV I + MDD
Sbjct: 371 GIYLTFETKESIRAKIDYVKDRILGGVWIFSVDMDD 406
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
++++E DT K YVK + LGGV I + MDD
Sbjct: 311 FLTFETNDTIAAKIDYVKDRILGGVWIWGVDMDD 344
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +3
Query: 135 AKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDNGEGGFW-------VSYEDPDTAGN 293
AKLIN +G P++ +++ K + + + W +++E+ +
Sbjct: 325 AKLINGKADGD-PYISRLSVKQKGIELFPYSWDNATKSSYIWKPKEKTFLTFENERSIEK 383
Query: 294 KASYVKTKNLGGVSIMDLSMDD 359
K YV NLGGV I + MDD
Sbjct: 384 KLQYVNEMNLGGVWIWSVDMDD 405
>Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 252 GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
G ++++E ++ K YVK + LGGV I + MDD
Sbjct: 371 GIYLTFETKESIRAKIDYVKDRILGGVWIFSVDMDD 406
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +3
Query: 261 VSYEDPDTAG--NKASYVKTKNLGGVSIMDLSMDD 359
V+ +D G +KA+YVK+KNLGGV I + DD
Sbjct: 200 VTLQDDRAIGEASKANYVKSKNLGGVWIWTMEHDD 234
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
++++E DT K YVK + LGGV I + MDD
Sbjct: 388 FLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDD 421
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
++++E DT K YVK + LGGV I + MDD
Sbjct: 386 FLTFETNDTIAAKIDYVKDRILGGVWIWAVDMDD 419
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFR 365
++++E + K YV KNLGGV I + MDD R
Sbjct: 344 FLAFETEKSIHAKIEYVMNKNLGGVWIWSVDMDDER 379
>Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical
protein C08H9.6 protein.
Length = 394
Score = 31.1 bits (67), Expect = 0.58
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
++++E+ + K YV+ KN+GG+ I ++ DD
Sbjct: 323 FLAFENEKSLSEKVIYVRNKNIGGLVIWNVDQDD 356
>U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical
protein C45E5.2 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.76
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
++++E + KA+YVK+ NLGGV I + DD
Sbjct: 311 FITFETEKSIEAKANYVKSMNLGGVWIWLMENDD 344
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
++++E + K YV+ NLGGV I + MDD
Sbjct: 388 YLTFEVKRSIAAKLDYVQNMNLGGVWIWQMDMDD 421
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 261 VSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
+++E + K Y+K N+GGV + + MDD
Sbjct: 760 LTFETDRSINEKTKYIKRVNIGGVCLWAVDMDD 792
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 261 VSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
+++E + K Y+K N+GGV + + MDD
Sbjct: 707 LTFETDRSINEKTKYIKRVNIGGVCLWAVDMDD 739
>Z78412-8|CAB01653.1| 400|Caenorhabditis elegans Hypothetical
protein M176.8 protein.
Length = 400
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
++++ED + K Y K +LGGV + + MDD
Sbjct: 340 FLTFEDKRSIKIKTDYAKKMDLGGVWLWSVDMDD 373
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 240 NGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
N ++ +E+ + K Y +NLGG+ I L +DD
Sbjct: 1268 NNGARMFLGFENERSLKEKMDYATNRNLGGLMIWALDLDD 1307
>L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical
protein F09G8.2 protein.
Length = 367
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 186 VNDPSKRFGTYAFRLPDDNGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFR 365
+NDP+ G ++ + FW Y D D + SY + GVS+ D S F
Sbjct: 67 INDPNVAVGATVSQVYSADKSNNFWFMYSDDDPIKSADSY--RGHAKGVSLFD-STTGFW 123
Query: 366 GLCTGDKYPILRAAKY 413
+ + +P +++ Y
Sbjct: 124 LIHSVPNFPPIKSFSY 139
>AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homolog
F09G8.2 protein.
Length = 332
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 186 VNDPSKRFGTYAFRLPDDNGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFR 365
+NDP+ G ++ + FW Y D D + SY + GVS+ D S F
Sbjct: 42 INDPNVAVGATVSQVYSADKSNNFWFMYSDDDPIKSADSY--RGHAKGVSLFD-STTGFW 98
Query: 366 GLCTGDKYPILRAAKY 413
+ + +P +++ Y
Sbjct: 99 LIHSVPNFPPIKSFSY 114
>AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical
protein T10D4.3 protein.
Length = 410
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
+V++E + K YVK KNLGGV I + ++
Sbjct: 347 FVTFETDKSIQEKMKYVKEKNLGGVWIWHVDANE 380
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 279 QDLRKKPRSHLHHYHQEGGRHRSQNVC*DR*PYEDEDAFRF 157
Q L +PR H+HQE RHR+ + D P + RF
Sbjct: 195 QQLAFRPRHRSSHHHQEPRRHRAPSPDPDYSPPLSRNKVRF 235
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 237 DNGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
+NG F + +E+ + K Y +NLGG+ I L +DD
Sbjct: 1805 NNGAKKF-LGFENERSLKEKMKYATDRNLGGLMIWALDLDD 1844
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 264 SYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
+YE+ + K YV +LGGV I + MDD
Sbjct: 377 TYENEKSIKVKLDYVNKMDLGGVWIWSVDMDD 408
>Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical
protein C08H9.7 protein.
Length = 447
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 243 GEGGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
G ++++ ED + K YV N+GG+++ + DD
Sbjct: 381 GPPTWFMTLEDKRSLREKTKYVADYNIGGITMWTIDQDD 419
>AL024499-5|CAC42318.1| 562|Caenorhabditis elegans Hypothetical
protein H38K22.5c protein.
Length = 562
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 159 NGKRPHLRKVNDPSKRFGTYAFRLPDDNGEGGFWVSYEDPD 281
NG P +K N S+ + DD GEGG VS+ P+
Sbjct: 71 NGNLPEDKKRNLTSEELNANLYAPHDDWGEGGAGVSHLTPE 111
>AL024499-4|CAC42317.1| 617|Caenorhabditis elegans Hypothetical
protein H38K22.5b protein.
Length = 617
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 159 NGKRPHLRKVNDPSKRFGTYAFRLPDDNGEGGFWVSYEDPD 281
NG P +K N S+ + DD GEGG VS+ P+
Sbjct: 71 NGNLPEDKKRNLTSEELNANLYAPHDDWGEGGAGVSHLTPE 111
>AL024499-3|CAA19707.1| 618|Caenorhabditis elegans Hypothetical
protein H38K22.5a protein.
Length = 618
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 159 NGKRPHLRKVNDPSKRFGTYAFRLPDDNGEGGFWVSYEDPD 281
NG P +K N S+ + DD GEGG VS+ P+
Sbjct: 71 NGNLPEDKKRNLTSEELNANLYAPHDDWGEGGAGVSHLTPE 111
>AF031840-1|AAC13676.1| 562|Caenorhabditis elegans GLY6c protein.
Length = 562
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 159 NGKRPHLRKVNDPSKRFGTYAFRLPDDNGEGGFWVSYEDPD 281
NG P +K N S+ + DD GEGG VS+ P+
Sbjct: 71 NGNLPEDKKRNLTSEELNANLYAPHDDWGEGGAGVSHLTPE 111
>AF031839-1|AAC13675.1| 617|Caenorhabditis elegans GLY6b protein.
Length = 617
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 159 NGKRPHLRKVNDPSKRFGTYAFRLPDDNGEGGFWVSYEDPD 281
NG P +K N S+ + DD GEGG VS+ P+
Sbjct: 71 NGNLPEDKKRNLTSEELNANLYAPHDDWGEGGAGVSHLTPE 111
>AF031838-1|AAC13674.1| 618|Caenorhabditis elegans GLY6a protein.
Length = 618
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 159 NGKRPHLRKVNDPSKRFGTYAFRLPDDNGEGGFWVSYEDPD 281
NG P +K N S+ + DD GEGG VS+ P+
Sbjct: 71 NGNLPEDKKRNLTSEELNANLYAPHDDWGEGGAGVSHLTPE 111
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 243 GEGGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
G ++++ ED + K YV N+GG+++ + DD
Sbjct: 393 GPPTWFLTLEDEKSLREKNRYVADHNIGGITMWTIDQDD 431
>AC084155-1|AAG23361.2| 352|Caenorhabditis elegans Hypothetical
protein Y45G5AM.6 protein.
Length = 352
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3
Query: 371 KTTKIIHGKVHDGHTAKVLCFHVTSFVSGRVRIFVRNPEATFTIIIRKAEGIGP 210
+T++I HG HD + +LC S+ + R+ + + T TI R+ P
Sbjct: 71 RTSRIHHGCEHDHFSDHILCVCQGSYCNDRIVMNTTRQKYTRTIQCRECSEKNP 124
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 258 WVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDD 359
+++ ED + K YV N+GG+++ + DD
Sbjct: 404 FLTLEDEQSLREKNRYVADHNIGGITMWTIDQDD 437
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,733,670
Number of Sequences: 27780
Number of extensions: 303910
Number of successful extensions: 725
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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