Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G12
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 64 1e-10
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 40 0.002
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 38 0.005
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 38 0.006
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 37 0.011
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 37 0.015
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 36 0.026
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 34 0.080
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 33 0.24
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 32 0.32
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 30 1.3
03_02_0466 - 8690469-8690522,8691008-8691113,8691216-8691457,869... 29 2.3
08_02_1458 - 27270834-27271320,27271752-27271961,27272627-272736... 28 5.2
08_02_0424 - 16957793-16958089,16958215-16958601,16958737-169597... 28 6.9
05_02_0078 - 6386278-6386291,6386462-6386594,6386721-6388613,639... 28 6.9
03_05_0213 - 22037268-22039496 28 6.9
05_01_0476 - 3896314-3898725 27 9.2
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +2
Query: 389 KIVAFKLSDIGEGIREVVIKEWFVKVGDTVEQFDNICEVQSDKAAVTITSRYDGVITRLY 568
++V L+ GEGI E + WFV GD V++F +CEVQSDKA + ITSR+ G + +++
Sbjct: 34 ELVDVPLAQTGEGIAECELLRWFVTEGDQVDEFQRLCEVQSDKATIEITSRFKGKVHQIH 93
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +2
Query: 359 RRFHTNQILNKIVAFKLSDIGEGIREVVIKEWFVKVGDTVEQFDNICEVQSDKAAVTITS 538
RR + + K+ + + + E I W GD V + D + V+SDKA + + +
Sbjct: 30 RRRRVSVVRAKVREIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVET 89
Query: 539 RYDGVITRLYHEVDQTALVGNPL 607
YDG++ + ++A VG P+
Sbjct: 90 FYDGIVAVVLVPAGESAPVGAPI 112
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = +2
Query: 290 RHRSSFTSNII--LKCSSNEGQIRWRR-FHTNQILNKIVAFKLSDIGEGIREVVIKEWFV 460
R ++F N I L S + GQI R F ++ L + + + E I W
Sbjct: 81 RSPNNFIPNTITGLNGSLSCGQIASARSFSSSADLPPHQEIGMPSLSPTMTEGNIARWLK 140
Query: 461 KVGDTVEQFDNICEVQSDKAAVTITSRYDGVITRLYH 571
K GD V + +CEV++DKA V + +G + ++ H
Sbjct: 141 KEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIH 177
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +2
Query: 359 RRFHTNQILNKIVAFKLSDIGEGIREVVIKEWFVKVGDTVEQFDNICEVQSDKAAVTITS 538
RR + KI + + + E I W GD V + D + V+SDKA + + +
Sbjct: 35 RRARMVVVRAKIREIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVET 94
Query: 539 RYDGVITRLYHEVDQTALVGNPL 607
+DG++ + ++A VG P+
Sbjct: 95 FHDGIVAAVLVPAGESAPVGAPI 117
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 443 IKEWFVKVGDTVEQFDNICEVQSDKAAVTITSRYDGVITRLYH 571
I W K GD V + +CEV++DKA V + +G + ++ H
Sbjct: 1638 IARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIH 1680
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 443 IKEWFVKVGDTVEQFDNICEVQSDKAAVTITSRYDGVITRLYH 571
I W K GD V + +CEV++DKA V + +G + ++ H
Sbjct: 93 IARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIH 135
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 443 IKEWFVKVGDTVEQFDNICEVQSDKAAVTITSRYDGVITR-LYHEVDQTALVGNPL 607
I +W + G+ +E D ICE+++DKA + S +G + + L E + VG P+
Sbjct: 168 IAKWRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAKILAPEGSKDVQVGQPI 223
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 34.3 bits (75), Expect = 0.080
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 416 IGEGIREVVIKEWFVKVGDTVEQFDNICEVQSDKAAVTITSRYDGVITRLYHEVDQTALV 595
+GE + + + + K GD VE + I ++++DK + + S GVI + T
Sbjct: 81 MGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIASEGDTVTP 140
Query: 596 G 598
G
Sbjct: 141 G 141
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 389 KIVAFKLSDIGEGIREVVIKEWFVKVGDTVEQFDNICEVQSDKAAVTITSRYDGVITRLY 568
KI + + + E I W GD + + D + V+SDKA + + + +DG + +
Sbjct: 48 KIREIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVL 107
Query: 569 HEVDQTALVGNPL 607
++A VG+ +
Sbjct: 108 VPAGESAPVGSAI 120
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 416 IGEGIREVVIKEWFVKVGDTVEQFDNICEVQSDKAAVTITSRYDGVITR 562
+GE I + + + K GD VE + I ++++DK + + S G+I +
Sbjct: 53 MGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVASPEAGIIEK 101
>11_01_0466 +
3607947-3610608,3610725-3611018,3611494-3611895,
3611984-3612217,3614113-3614138,3614446-3614633,
3615707-3617670,3617938-3618423,3618527-3618894
Length = 2207
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = -1
Query: 492 LSNCSTVSPTLTNHSLITTSRIPSPISDSLKATILLRI*FVWK 364
L C V + H L T ++ P++ ++ I++ + F+WK
Sbjct: 628 LPECPIVPSNKSKHKLYVTLKVVIPLASTVTLAIVILVIFIWK 670
>03_02_0466 -
8690469-8690522,8691008-8691113,8691216-8691457,
8691477-8691546,8692224-8692499,8693058-8693137,
8693408-8693489,8693566-8693663,8693868-8693936,
8694015-8694113,8694681-8694737,8694874-8695039,
8695152-8695196,8695286-8695347,8695425-8695532,
8695719-8695769,8695843-8695944,8696362-8696448,
8696560-8696823,8696977-8697189,8697337-8697398,
8697517-8697849,8697943-8698138
Length = 973
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -3
Query: 622 DIYIDKWISNKSCLIYFMVKSCDNTIVATCDSNSCLVALYFTNIVKLFYCITDFDEPFFN 443
D+YI + S S ++ M + + ++ A CD SCL L F N + I+ FD
Sbjct: 567 DLYIAQ--SMPSFILLNMRRLIEQSLPAECDIRSCLNTLQFLNKKREALNISGFDSQVIG 624
Query: 442 H-DFSDSFANI 413
D S S ++
Sbjct: 625 RKDMSKSIIDV 635
>08_02_1458 - 27270834-27271320,27271752-27271961,27272627-27273624,
27274099-27274195,27274278-27274393,27274465-27274590,
27275123-27275233,27275347-27275428,27275844-27275989,
27276457-27276650,27277277-27277388,27277869-27278001,
27278295-27278437,27278488-27278562,27278830-27278937,
27279072-27279197,27279752-27279836,27280358-27280440,
27280545-27280625,27280709-27280789,27281960-27282034,
27282112-27282498,27282902-27283036
Length = 1396
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 413 DIGEGIREVVIKEWFVKVGDTVEQFDNICEVQSDKAAVTITSRY 544
D+ EGIREV++ E F ++ F+ E +A+ I S +
Sbjct: 883 DLTEGIREVLLAESFTGPFPNLQVFETPTETHGGGSAIDIISNW 926
>08_02_0424 -
16957793-16958089,16958215-16958601,16958737-16959735,
16959840-16959994,16960082-16960169,16960241-16960344,
16960424-16960646,16960839-16960923,16961006-16961397,
16962841-16963005
Length = 964
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 439 DFSDSFANIRQLKSDNFIENLICVETPPSDL 347
D D+F I +L +DNF +I + T PSD+
Sbjct: 506 DVLDTFRVIAELPADNFGAYIISMATAPSDV 536
>05_02_0078 -
6386278-6386291,6386462-6386594,6386721-6388613,
6391153-6391239,6391691-6391765,6393982-6394327,
6394428-6394450
Length = 856
Score = 27.9 bits (59), Expect = 6.9
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 275 LMQSDRHRSSFTSNIIL-KCSSNEGQIRWRRFHTNQILNKIVAFKLSDIGEGIREVVIKE 451
+++ RSSFT +I KCS+ +G H L K V F G+ ++ I+
Sbjct: 226 ILRKHTKRSSFTVSINKEKCSNLKGSEAIELSHK---LGKHVTFS------GVDDIHIRN 276
Query: 452 WFVKVGDTVEQFDNICEVQSDKA 520
K+ T+ Q N C V SDK+
Sbjct: 277 ---KLSSTLPQLQNHCNVYSDKS 296
>03_05_0213 - 22037268-22039496
Length = 742
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 245 NAGRAHKVWLLMQSDRHRSS-FTSNIILKCSSNEGQIRWRRFHTNQILNK 391
+ G A KV +M + H FT NI++ C GQ+ + NQ++++
Sbjct: 301 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350
>05_01_0476 - 3896314-3898725
Length = 803
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 350 IRWRRFHTNQILNKIVAFKLSDIGEGIR 433
+R + HT+Q++ IVAF+ SD+ G +
Sbjct: 484 LRKKCLHTSQLVGGIVAFRYSDLCHGTK 511
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,605,266
Number of Sequences: 37544
Number of extensions: 262877
Number of successful extensions: 731
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -