Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G12
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    27   0.11 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    27   0.11 
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              23   2.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.4  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 305 FTSNIILKCSSNEGQIRWRRFHTNQILNKIVAFKLSDI 418
           F S+ +   S++   + WRR  T +ILN + A KLS I
Sbjct: 489 FMSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKI 526


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 305 FTSNIILKCSSNEGQIRWRRFHTNQILNKIVAFKLSDI 418
           F S+ +   S++   + WRR  T +ILN + A KLS I
Sbjct: 527 FMSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKI 564


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 504 TSQILSNCSTVSPTLT 457
           T+++L NC  VSP +T
Sbjct: 25  TAKLLGNCVRVSPVIT 40


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 506 QSDKAAVTITSRYDGVITRLYHEVDQTALVGNPLI 610
           Q     V I    DGV   L +   + ++ GNPLI
Sbjct: 69  QQSTVFVAIPRIQDGVPLTLGYVTREVSIDGNPLI 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,218
Number of Sequences: 438
Number of extensions: 3029
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)