Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G11
(555 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical ... 29 2.2
Z48638-7|CAA88571.2| 340|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC006662-5|AAF39894.1| 501|Caenorhabditis elegans Hypothetical ... 29 3.0
Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF078790-4|AAC26932.1| 311|Caenorhabditis elegans Hypothetical ... 27 6.9
AC006681-3|AAK85494.1| 311|Caenorhabditis elegans Hypothetical ... 27 6.9
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 27 9.1
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 27 9.1
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 9.1
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 9.1
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 9.1
AF039049-11|AAB94246.1| 499|Caenorhabditis elegans Cytochrome p... 27 9.1
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 27 9.1
>AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical
protein C53D5.5 protein.
Length = 642
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 337 TKGDLPPNFQYNTFEDLDNFFPEY 408
T + PP YNTF D DN PEY
Sbjct: 8 TSSNPPPVQYYNTFPDDDNLPPEY 31
>Z48638-7|CAA88571.2| 340|Caenorhabditis elegans Hypothetical
protein ZK892.4 protein.
Length = 340
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 304 TYRLKDGEVVETKGDLPPNFQYNTFEDLDNFFPEYFMNLGNLLEEL 441
TY+ KD + V G + P F N F+ L+ + F+N G + E+L
Sbjct: 224 TYKTKDDKFVAV-GAVEPKFYQNLFKLLNVDGRDLFVNPGKITEDL 268
>AC006662-5|AAF39894.1| 501|Caenorhabditis elegans Hypothetical
protein H23L24.2 protein.
Length = 501
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +3
Query: 36 VYSCTNIDNKYITQVKGISHHKQVRQIRYQPHFGVIVFGVLNTQLRGQNEGFY----HIK 203
+Y CT+ N ++ Q + H QV R+ PH F + N ++ + +I+
Sbjct: 398 LYQCTSSHNVHVGQSREWCHSMQVPFFRFSPHLAA-PFELDNCKIEDITNAMFDNEVYIR 456
Query: 204 CFISPEYLELCR 239
I +LCR
Sbjct: 457 TEIKQHISDLCR 468
>Z54281-2|CAA91045.3| 399|Caenorhabditis elegans Hypothetical
protein F46C5.3 protein.
Length = 399
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 226 WSFAVPQSSGVGAFAYQDSSGNRYGGTYRL-KDGEVVETKGDLPPNFQYNTFEDLDNFFP 402
W+ VP G DS N+ L KD +ET G + PNF Y+ F+ ++ ++
Sbjct: 178 WANLVPYDYGSVMHYSADSFSNKDDEQTMLPKDRSFIETMGSMIPNF-YD-FDQINQYYQ 235
Query: 403 EY 408
Y
Sbjct: 236 CY 237
>AF078790-4|AAC26932.1| 311|Caenorhabditis elegans Hypothetical
protein F36H12.8 protein.
Length = 311
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 36 VYSCTNIDNKYITQVKGISHHKQV 107
VY CT+ KY +V+GIS QV
Sbjct: 34 VYLCTDATGKYALKVEGISEAMQV 57
>AC006681-3|AAK85494.1| 311|Caenorhabditis elegans Hypothetical
protein R13H9.5 protein.
Length = 311
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 36 VYSCTNIDNKYITQVKGISHHKQV 107
VY CT+ KY +V+GIS QV
Sbjct: 34 VYLCTDATGKYALKVEGISEAMQV 57
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 253 GVGAFAYQDSSGNRYGGT-YRLKDGEV-VETKGDLPPNF 363
G G+F Q SG+++GGT Y+ K + T DL PNF
Sbjct: 391 GHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDL-PNF 428
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform b
protein.
Length = 4203
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 253 GVGAFAYQDSSGNRYGGT-YRLKDGEV-VETKGDLPPNF 363
G G+F Q SG+++GGT Y+ K + T DL PNF
Sbjct: 332 GHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDL-PNF 369
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 253 GVGAFAYQDSSGNRYGGT-YRLKDGEV-VETKGDLPPNF 363
G G+F Q SG+++GGT Y+ K + T DL PNF
Sbjct: 629 GHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDL-PNF 666
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 253 GVGAFAYQDSSGNRYGGT-YRLKDGEV-VETKGDLPPNF 363
G G+F Q SG+++GGT Y+ K + T DL PNF
Sbjct: 629 GHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDL-PNF 666
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 253 GVGAFAYQDSSGNRYGGT-YRLKDGEV-VETKGDLPPNF 363
G G+F Q SG+++GGT Y+ K + T DL PNF
Sbjct: 629 GHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDL-PNF 666
>AF039049-11|AAB94246.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 35B2 protein.
Length = 499
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 307 YRLKDGEVVETK-GDLPPNFQYNTFEDLDNFFPEYFMNLGNLLEELPAF 450
Y + G V+ + G L N + F++ D F+PE F+ G LL ++ F
Sbjct: 391 YEIDSGTVMTAQLGALHVN--NDIFKNADKFYPERFIENGKLLNQVIPF 437
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 253 GVGAFAYQDSSGNRYGGT-YRLKDGEV-VETKGDLPPNF 363
G G+F Q SG+++GGT Y+ K + T DL PNF
Sbjct: 332 GHGSFIQQQQSGSQFGGTAYQSKGAQAPAGTHLDL-PNF 369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,416,163
Number of Sequences: 27780
Number of extensions: 301837
Number of successful extensions: 771
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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