Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G09
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    25   0.69 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    25   0.69 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    25   0.69 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    25   0.69 

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 594 HPSCQINILHEFIHHYFIEK 535
           H   ++  LH+F HH F+E+
Sbjct: 122 HEEVKLQHLHQFPHHDFLER 141


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 448 HYITYYSMKNFKWTSERGSP*SPPTIYY 365
           HY  Y+    + +T    +P SP  +YY
Sbjct: 38  HYSNYHYEDPYGYTGSEETPPSPQEVYY 65


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 448 HYITYYSMKNFKWTSERGSP*SPPTIYY 365
           HY  Y+    + +T    +P SP  +YY
Sbjct: 38  HYSNYHYEDPYGYTGSEETPPSPQEVYY 65


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 448 HYITYYSMKNFKWTSERGSP*SPPTIYY 365
           HY  Y+    + +T    +P SP  +YY
Sbjct: 38  HYSNYHYEDPYGYTGSEETPPSPQEVYY 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,995
Number of Sequences: 336
Number of extensions: 2940
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)