Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G09
         (634 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)              63   2e-10
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.15 

>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 6116

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +2

Query: 2    ECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL 106
            ECSAK+K+GVREVFETATRAALQ KKKKK +C LL
Sbjct: 6082 ECSAKTKDGVREVFETATRAALQTKKKKKGKCVLL 6116


>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 191

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +2

Query: 2   ECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 106
           ECSA +++G++ VF+ A  AAL+  + +KK +C LL
Sbjct: 156 ECSALTQKGLKNVFDEAILAALEPPEPQKKKKCRLL 191


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,623,133
Number of Sequences: 59808
Number of extensions: 365088
Number of successful extensions: 798
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)