Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G09
(634 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 58 4e-09
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 58 4e-09
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 36 0.024
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 36 0.024
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 35 0.056
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 35 0.056
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 35 0.056
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 33 0.13
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 33 0.13
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 33 0.13
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 33 0.13
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 33 0.13
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 30 1.2
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 28 6.4
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 28 6.4
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL 106
ECSAK+K+G+REVFE AT+AALQ KKKKK++C +L
Sbjct: 158 ECSAKTKDGIREVFEKATQAALQQKKKKKSKCMIL 192
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL 106
ECSAK+K+G+REVFE AT+AALQ KKKKK++C +L
Sbjct: 158 ECSAKTKDGIREVFEKATQAALQQKKKKKSKCMIL 192
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVK-KKKKTRCSLL 106
ECSA +++G+ +VFE A R+ L K +KKK C+++
Sbjct: 160 ECSALTQQGLTQVFEDAVRSILHPKPQKKKKSCNIM 195
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVK-KKKKTRCSLL 106
ECSA +++G+ +VFE A R+ L K +KKK C+++
Sbjct: 160 ECSALTQQGLTQVFEDAVRSILHPKPQKKKKSCNIM 195
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/36 (41%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 106
ECSA ++ G+++VF+ A RA L ++ KK++C++L
Sbjct: 156 ECSALTQRGLKQVFDEAIRAVLTPPQRAKKSKCTVL 191
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/36 (41%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 106
ECSA ++ G+++VF+ A RA L ++ KK++C++L
Sbjct: 156 ECSALTQRGLKQVFDEAIRAVLTPPQRAKKSKCTVL 191
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/36 (41%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 106
ECSA ++ G+++VF+ A RA L ++ KK++C++L
Sbjct: 94 ECSALTQRGLKQVFDEAIRAVLTPPQRAKKSKCTVL 129
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/36 (38%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 106
ECSA ++ G+++VF+ A RA + ++ KK++C++L
Sbjct: 156 ECSALTQRGLKQVFDEAIRAVVTPPQRAKKSKCTVL 191
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/36 (41%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 106
ECSA +++G++ VF+ A AAL +++KK +C++L
Sbjct: 156 ECSALTQKGLKNVFDEAILAALDPPQQEKKKKCNIL 191
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/36 (41%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 106
ECSA +++G++ VF+ A AAL +++KK +C++L
Sbjct: 153 ECSALTQKGLKNVFDEAILAALDPPQQEKKKKCNIL 188
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/36 (38%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 106
ECSA ++ G+++VF+ A RA + ++ KK++C++L
Sbjct: 156 ECSALTQRGLKQVFDEAIRAVVTPPQRAKKSKCTVL 191
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/36 (38%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAAL-QVKKKKKTRCSLL 106
ECSA ++ G+++VF+ A RA + ++ KK++C++L
Sbjct: 156 ECSALTQRGLKQVFDEAIRAVVTPPQRAKKSKCTVL 191
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/36 (38%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 106
ECSA +++ ++ VF+ A AAL +++KK +C++L
Sbjct: 156 ECSALTEKELKNVFDEAILAALDPPQQEKKKKCNIL 191
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKKTR 94
ECSA ++ G+++VF+ A R L + +TR
Sbjct: 156 ECSALTQIGLKQVFDEAIRTGLTPPQTPQTR 186
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKKTR 94
ECSA ++ G+++VF+ A R L + +TR
Sbjct: 156 ECSALTQIGLKQVFDEAIRTGLTPPQTPQTR 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,704,069
Number of Sequences: 27780
Number of extensions: 272907
Number of successful extensions: 615
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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