Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G09
(634 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35950.1 68417.m05115 Rac-like GTP-binding protein (ARAC6) id... 37 0.013
At3g51300.1 68416.m05615 Rac-like GTP-binding protein (ARAC11) /... 36 0.017
At2g17800.1 68415.m02063 Rac-like GTP-binding protein (ARAC1) (A... 36 0.022
At5g45970.1 68418.m05652 Rac-like GTP-binding protein (ARAC2) id... 36 0.030
At1g20090.1 68414.m02514 Rac-like GTP-binding protein (ARAC4) / ... 35 0.039
At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) / ... 34 0.068
At1g75840.1 68414.m08809 Rac-like GTP-binding protein (ARAC5) / ... 34 0.090
At4g28950.1 68417.m04136 Rac-like GTP-binding protein (ARAC7) id... 33 0.21
At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10) i... 31 0.48
At4g24000.1 68417.m03449 cellulose synthase family protein simil... 29 2.6
At3g48040.1 68416.m05237 Rac-like GTP-binding protein (ARAC8) id... 29 2.6
At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9) id... 29 3.4
>At4g35950.1 68417.m05115 Rac-like GTP-binding protein (ARAC6)
identical to rac-like GTP binding protein Arac6
GI:3406757 from [Arabidopsis thaliana]
Length = 197
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKKTR 94
ECS+KS+E V+ VF+ A R LQ K+KK +
Sbjct: 157 ECSSKSQENVKGVFDAAIRVVLQPPKQKKKK 187
>At3g51300.1 68416.m05615 Rac-like GTP-binding protein (ARAC11) /
Rho-like GTP-binding protein (ROP1) identical to GTP
binding protein Rop1At [Arabidopsis thaliana]
GI:2558666, rac-like GTP binding protein Arac11
[Arabidopsis thaliana] GI:3603426
Length = 197
Score = 36.3 bits (80), Expect = 0.017
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL*VC 115
ECS+K++E V+ VF+ A R LQ K+KK + C
Sbjct: 157 ECSSKTQENVKAVFDAAIRVVLQPPKQKKKKSKAQKAC 194
>At2g17800.1 68415.m02063 Rac-like GTP-binding protein (ARAC1)
(ATGP2) identical to Rac-like GTP-binding protein
(ARAC1) SP:Q38902 from [Arabidopsis thaliana]
Length = 197
Score = 35.9 bits (79), Expect = 0.022
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL*VC 115
ECS+K++E V+ VF+ A R LQ K+KK + C
Sbjct: 157 ECSSKTQENVKGVFDAAIRVVLQPPKQKKKKSKAQKAC 194
>At5g45970.1 68418.m05652 Rac-like GTP-binding protein (ARAC2)
identical to RAC-like GTP binding protein ARAC2
SP:Q38903
Length = 201
Score = 35.5 bits (78), Expect = 0.030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKK 88
ECS+K+++ V+ VF+TA R AL+ K KK
Sbjct: 157 ECSSKTQQNVKAVFDTAIRVALRPPKAKK 185
>At1g20090.1 68414.m02514 Rac-like GTP-binding protein (ARAC4) /
Rho-like GTP-binding protein (ROP2) identical to
SP:Q38919 RAC-like GTP binding protein ARAC4 (GTP
binding protein ROP2) [Arabidopsis thaliana], Rho-like
GTP binding protein [Arabidopsis thaliana] GI:2654009
Length = 195
Score = 35.1 bits (77), Expect = 0.039
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQ-----VKKKKKTRCSLL 106
ECS+K+++ V+ VF+ A + LQ KKK K RC+ L
Sbjct: 156 ECSSKTQQNVKAVFDAAIKVVLQPPKQKKKKKNKNRCAFL 195
>At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) /
Rho-like GTP-binding protein (ROP6) identical to
SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
identical to cDNA Rho-like GTP binding protein (Rop6)
GI:2645642
Length = 198
Score = 34.3 bits (75), Expect = 0.068
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKKTR 94
ECSAK+++ V+ VF+ A + LQ K KK +
Sbjct: 157 ECSAKTQQNVKAVFDAAIKVVLQPPKNKKKK 187
>At1g75840.1 68414.m08809 Rac-like GTP-binding protein (ARAC5) /
Rho-like GTP-binding protein (ROP4) identical to
RAC-like GTP-binding protein (ARAC5) SP:Q38937
[Arabidopsis thaliana], Rho-like GTP binding protein
[Arabidopsis thaliana] GI:2654009; identical to cDNA
Rho-like GTP binding protein (Rop4) GI:2654008
Length = 196
Score = 33.9 bits (74), Expect = 0.090
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQ-----VKKKKKTRCSLL 106
ECS+K+++ V+ VF+ A + LQ KKK K RC L
Sbjct: 157 ECSSKTQQNVKAVFDAAIKVVLQPPKQKKKKKNKNRCVFL 196
>At4g28950.1 68417.m04136 Rac-like GTP-binding protein (ARAC7)
identical to rac GTP binding protein Arac7 GI:3702962
from [Arabidopsis thaliana]
Length = 209
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKK 88
ECS+K+++ V+ VF+TA + LQ ++K+
Sbjct: 155 ECSSKTQQNVKAVFDTAIKVVLQPPRRKE 183
>At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10)
identical to rac GTP binding protein Arac10 [Arabidopsis
thaliana] GI:3702964, rac-like GTP binding protein
Arac10 [Arabidopsis thaliana] GI:7211193; contains Pfam
profile: PF00071 Ras family
Length = 215
Score = 31.5 bits (68), Expect = 0.48
Identities = 13/33 (39%), Positives = 26/33 (78%), Gaps = 2/33 (6%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQ--VKKKKKTR 94
ECS+K+++ V+ VF++A + ++ VK+K+KT+
Sbjct: 159 ECSSKTQQNVKAVFDSAIKEVIKPLVKQKEKTK 191
>At4g24000.1 68417.m03449 cellulose synthase family protein similar
to cellulose synthase from Gossypium hirsutum
[gi:1706956], cellulose synthase-5 from Zea mays
[gi:9622882]
Length = 722
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 390 HDHPRLYIMLRHLHLFFIDNL*NIQVPIVKV*PHEY*VGVRATRAATSRQLSVS 229
HDHP + ++L+H + NL + KV PH + G T S ++ S
Sbjct: 235 HDHPTIIMVLQHNETEMMPNLIYVSREKSKVSPHHFKAGALNTLLRVSAVMTNS 288
>At3g48040.1 68416.m05237 Rac-like GTP-binding protein (ARAC8)
identical to rac GTP binding protein Arac8 GI:3702966
from [Arabidopsis thaliana]
Length = 208
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/33 (36%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQ--VKKKKKTR 94
ECS+K+++ V+ VF+ A + ++ VK+K+K +
Sbjct: 159 ECSSKTQQNVKAVFDAAIKVVIKPAVKQKEKKK 191
>At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9)
identical to rac-like protein ARAC9 GI:5381419 from
[Arabidopsis thaliana]
Length = 209
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 2 ECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL*VC 115
ECS+K++ V+ VF+ A + L K K R + +C
Sbjct: 169 ECSSKAQMNVKAVFDEAIKVVLHPPSKTKKRKRKIGLC 206
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,636,815
Number of Sequences: 28952
Number of extensions: 240378
Number of successful extensions: 546
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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