Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G08
         (489 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical pr...    33   0.15 
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    33   0.15 
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    33   0.15 
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr...    30   0.78 
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    29   1.4  
U40954-1|ABA00179.1|  251|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical p...    28   4.2  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z78200-6|CAB01585.2|  524|Caenorhabditis elegans Hypothetical pr...    27   7.3  
AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical ...    27   7.3  
AL117207-17|CAI79269.1|  421|Caenorhabditis elegans Hypothetical...    27   9.7  

>U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical
           protein K02G10.5 protein.
          Length = 655

 Score = 32.7 bits (71), Expect = 0.15
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 380 IEKCAENCISTTEYNPVCGSDNK-TYKNQGRLFCA 481
           +E C+ENC   + +NPVC  D+K T+ +     CA
Sbjct: 442 LETCSENCHCDSFFNPVCSEDSKLTFLSPCHAGCA 476


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 32.7 bits (71), Expect = 0.15
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 410 TTEYNPVCGSDNKTYKNQGRL 472
           T E+  VCGSD KTY N+ RL
Sbjct: 469 TDEFKEVCGSDGKTYSNECRL 489



 Score = 30.3 bits (65), Expect = 0.78
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 386 KCAENCISTTEYNPVCGSDNKTYKNQ 463
           KC+E C   + +  VCG+D KTY N+
Sbjct: 318 KCSEQCTMNSAH--VCGTDGKTYLNE 341


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 32.7 bits (71), Expect = 0.15
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 410 TTEYNPVCGSDNKTYKNQGRL 472
           T E+  VCGSD KTY N+ RL
Sbjct: 477 TDEFKEVCGSDGKTYSNECRL 497



 Score = 30.3 bits (65), Expect = 0.78
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 386 KCAENCISTTEYNPVCGSDNKTYKNQ 463
           KC+E C   + +  VCG+D KTY N+
Sbjct: 326 KCSEQCTMNSAH--VCGTDGKTYLNE 349


>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
           protein F29G6.1 protein.
          Length = 1170

 Score = 30.3 bits (65), Expect = 0.78
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 398 NCISTTEYNPVCGSDNKTYKNQGRLFCAQ 484
           +C   +   PVCG+DN TY N   L C Q
Sbjct: 18  DCDCPSVIRPVCGTDNVTYNNLCFLRCVQ 46



 Score = 29.5 bits (63), Expect = 1.4
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 371 RQTIEKCAENCISTTEYNPVCGSDNKTYKN 460
           R + + C  NC + TE++PVC ++   Y+N
Sbjct: 109 RCSSKDCNHNC-TNTEFDPVCDTNGSVYRN 137


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +3

Query: 315 KHRYQVKGKHQLLALVEHHDKQLRNARRIAFQQPNTTPCVVAIIKLTKTREDYF 476
           + R++ + +H   AL +H  ++L   +R A     +  CV+++IK   + E  F
Sbjct: 81  EQRHRRRRRHNETALEDHLSEKLSREKRAAAHIMRSRKCVISVIKKMSSMECSF 134


>U40954-1|ABA00179.1|  251|Caenorhabditis elegans Hypothetical
           protein ZK813.6 protein.
          Length = 251

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 383 EKCAENCISTTEYNPVCGSDNKTYKN 460
           EKC+      TE+NPVC    +T+ N
Sbjct: 117 EKCSCTAPCPTEWNPVCDKKGQTHAN 142


>Z81112-6|CAB03277.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 395 ENCISTTEYNPVCGSD-NKTYKN 460
           +  + T EY P C SD  KTYKN
Sbjct: 73  DGILETKEYKPACMSDAKKTYKN 95


>Z77136-10|CAB00887.1|  673|Caenorhabditis elegans Hypothetical
           protein ZC376.3 protein.
          Length = 673

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 395 ENCISTTEYNPVCGSD-NKTYKN 460
           +  + T EY P C SD  KTYKN
Sbjct: 73  DGILETKEYKPACMSDAKKTYKN 95


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 374 QTIEKCAENCISTTEYNPVCGSDNKTYKNQGRLFCAQN 487
           Q ++ C    + T E NP   S+   YKN  R+ C  N
Sbjct: 284 QCVDACETETV-TDEANPCKFSNAAKYKNGSRIICGPN 320


>Z78200-6|CAB01585.2|  524|Caenorhabditis elegans Hypothetical
           protein T04H1.8 protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 464 PGFCKFYYRYHTRGCIRLLKCNSPRISQLFVVMF 363
           P F KF   YH    +RL+  +   +  LF+ +F
Sbjct: 471 PNFSKFPKNYHPNTLVRLIDSSIALVFMLFIFVF 504


>AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical
           protein Y97E10B.1 protein.
          Length = 588

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 446 YYRYHTRGCIRLLKCNSPRI 387
           YYRYH  G I  +KC  P++
Sbjct: 523 YYRYHYSGRIGEIKCPGPQL 542


>AL117207-17|CAI79269.1|  421|Caenorhabditis elegans Hypothetical
           protein Y60A3A.25 protein.
          Length = 421

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 167 IDKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNN 265
           +D   + + QD N   W+ + N  + Q P DNN
Sbjct: 106 MDMQPYQEYQDNNESGWVDLNNDNQFQQP-DNN 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,075,207
Number of Sequences: 27780
Number of extensions: 262035
Number of successful extensions: 701
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)