Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G06
(524 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 62 4e-10
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 50 2e-06
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 44 6e-05
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 42 4e-04
05_04_0328 - 20303330-20303440,20304123-20304942,20305170-203053... 32 0.25
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 31 0.75
10_01_0081 - 1033837-1034090,1034500-1034686,1034713-1034941,103... 30 0.99
09_04_0608 + 18924648-18924899,18926341-18926435,18926903-189272... 29 2.3
08_02_1279 - 25841767-25842017,25842181-25842418,25842685-258430... 29 2.3
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 28 4.0
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 28 5.3
02_01_0790 + 5925048-5925165,5926133-5926268,5926832-5926913,592... 28 5.3
01_01_0559 - 4109690-4111003 28 5.3
07_03_1723 - 29038701-29039213,29039341-29039413,29039504-290395... 27 7.0
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 27 7.0
09_04_0303 - 16505782-16506902,16507232-16507292 27 9.2
04_04_1363 - 32898345-32898371,32898986-32899837,32900234-329005... 27 9.2
04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 27 9.2
01_06_0074 + 26196923-26197136,26199487-26199635,26199724-261998... 27 9.2
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 27 9.2
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 61.7 bits (143), Expect = 4e-10
Identities = 33/77 (42%), Positives = 43/77 (55%)
Frame = -1
Query: 455 WAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVTG 276
W AQ VT+ AG+ISYP DTVRRRMM+Q Y + W I K+E G
Sbjct: 254 WVTAQAVTSMAGLISYPLDTVRRRMMMQ--SGMDVQMYSSTLDCWRKIYKVEGIKSFYRG 311
Query: 275 ALSDVVRAAAGAFVMVL 225
ALS++ R+ A ++VL
Sbjct: 312 ALSNMFRSTGAAAILVL 328
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = -1
Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
S+A+ +T AG+ SYP DTVRRRMM+ A Y+ + +++ I K E L
Sbjct: 290 SFALGWLITNGAGLASYPIDTVRRRMMMTSGEAV---KYKSSMDAFSQILKNEGAKSLFK 346
Query: 278 GALSDVVRAAAGAFVM 231
GA ++++RA AGA V+
Sbjct: 347 GAGANILRAIAGAGVL 362
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 44.4 bits (100), Expect = 6e-05
Identities = 28/76 (36%), Positives = 41/76 (53%)
Frame = -1
Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
S+ + +T AG+ SYP DTVRRRMM+ A Y + ++ I E L
Sbjct: 288 SFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAV---KYNSSLDAFKQIVAKEGAKSLFK 344
Query: 278 GALSDVVRAAAGAFVM 231
GA ++++RA AGA V+
Sbjct: 345 GAGANILRAVAGAGVL 360
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -1
Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMI 375
S+A+ +TTF+G +YPFDT+RRRMM+
Sbjct: 231 SFALGWAITTFSGACAYPFDTLRRRMML 258
>05_04_0328 -
20303330-20303440,20304123-20304942,20305170-20305368,
20305417-20305954
Length = 555
Score = 32.3 bits (70), Expect = 0.25
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 327 IMDDHSQD*GWNPPCHGSPLGRGQSCRRCVRD 232
++ H + W PPC G + R + C C+RD
Sbjct: 221 LLMSHPKRNPWPPPCSGGVVRRWKECANCIRD 252
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 30.7 bits (66), Expect = 0.75
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -1
Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQ 372
S A A TFA ++ YP DTVRR+M ++
Sbjct: 288 SLATALLSATFATLMCYPLDTVRRQMQMK 316
>10_01_0081 -
1033837-1034090,1034500-1034686,1034713-1034941,
1035328-1035638
Length = 326
Score = 30.3 bits (65), Expect = 0.99
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -3
Query: 213 NQESPPKYNAKTLCSPSLISITIPYH-LTALPCNHILVNRCNNDFQ*HPSSFINYFTLDI 37
++E PP + + S SL + YH +TA PC+H N + P F NYF DI
Sbjct: 68 DEEPPPAPDLEQ--SWSLAASRQAYHNITAAPCHHTSGNASRTLPRSAPKFFKNYF--DI 123
Query: 36 HHKKLKYTHD 7
+ ++ HD
Sbjct: 124 VRRNNEHLHD 133
>09_04_0608 +
18924648-18924899,18926341-18926435,18926903-18927236,
18927345-18927582,18927813-18928069
Length = 391
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 425 AGIISYPFDTVRRRMMIQYVRAKCDNH 345
A IS+P + R+R+M+ ++ KC H
Sbjct: 310 ASTISFPLEVARKRLMVGALQGKCPPH 336
>08_02_1279 -
25841767-25842017,25842181-25842418,25842685-25843018,
25843498-25843592,25845461-25845700
Length = 385
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 425 AGIISYPFDTVRRRMMIQYVRAKCDNH 345
A IS+P + R+R+M+ ++ KC H
Sbjct: 306 ASTISFPLEVARKRLMVGTLQGKCPPH 332
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/90 (21%), Positives = 39/90 (43%)
Frame = -1
Query: 467 IVISWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTP 288
++IS A + I++P D VRRRM ++ + + ++ I + E
Sbjct: 237 VLISLACGSLSGIASSTITFPLDLVRRRMQLEGAAGRARVYQTGLFGTFGHIVRTESLRG 296
Query: 287 LVTGALSDVVRAAAGAFVMVLGRLTIKNLL 198
L G L + + ++ + T+K++L
Sbjct: 297 LYRGILPEYCKVVPSVGIVFMTYETLKSIL 326
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 273 PLGRGQSCRRCVRDGPWTTDNQESPPKYNAKTLCSPSLISITIPYHL 133
P+G R C+ P+ E P ++A +C+ ++ SIT+P+ L
Sbjct: 288 PIGPPSLSRSCM--SPYLYIQDEKP--FHASAVCAAAIHSITVPFRL 330
>02_01_0790 +
5925048-5925165,5926133-5926268,5926832-5926913,
5927772-5927947,5928594-5928680,5928817-5928956,
5929546-5929784
Length = 325
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -3
Query: 231 GPWTTDNQESPPKYNAK 181
GP T+D QESPP N K
Sbjct: 283 GPATSDEQESPPNANGK 299
>01_01_0559 - 4109690-4111003
Length = 437
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -3
Query: 306 D*GWNPPCHGSPLGRGQSCRRCVRDGPW 223
D GW PP H PL C+ PW
Sbjct: 381 DYGWGPPAHVVPLTNLDYIATCILVRPW 408
>07_03_1723 - 29038701-29039213,29039341-29039413,29039504-29039594,
29039684-29039741,29039829-29039905,29040004-29040214,
29040339-29040386,29042496-29042608,29043270-29043341,
29044372-29046336,29046434-29046641,29046847-29047165,
29047813-29047937,29048024-29048157,29049089-29049164,
29049276-29049428,29049829-29050532,29050636-29050811,
29050945-29051107,29051199-29051341,29051802-29051914,
29053113-29053237,29053867-29054016,29054753-29054921,
29055201-29055418,29055499-29055709
Length = 2135
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 211 IVSRPRTITN---APAAALTTSERAPVTRGVPTSI 306
IVS+P +T+ + +TS P+T G P+SI
Sbjct: 1364 IVSKPEVVTSEVTGTTVSASTSSSVPITEGKPSSI 1398
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 468 HRHQLGHRPNRHHIRRYHLVSIRH 397
HR Q H+ RHH R +H RH
Sbjct: 126 HRDQHDHQSQRHHHRHHHHQRQRH 149
>09_04_0303 - 16505782-16506902,16507232-16507292
Length = 393
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/42 (23%), Positives = 25/42 (59%)
Frame = -3
Query: 279 GSPLGRGQSCRRCVRDGPWTTDNQESPPKYNAKTLCSPSLIS 154
G P+ G++ RR +++G W + P++ + +L + ++I+
Sbjct: 334 GEPITVGRTVRRLIKEGGWGACYRGLGPRWASMSLSATTMIT 375
>04_04_1363 -
32898345-32898371,32898986-32899837,32900234-32900500,
32900723-32901025,32902329-32902433,32903361-32903548,
32903628-32903721
Length = 611
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 375 PVRPGQVRQSLRVPHSIMDDHSQD*GWNP 289
PV P QV +L P D+HS+D G++P
Sbjct: 509 PVPPSQVTLALPAPGD--DEHSEDDGYSP 535
>04_04_0465 +
25427065-25427113,25428099-25428227,25428387-25428479,
25428681-25428953,25429037-25429288,25429735-25430118,
25430243-25430483,25431986-25432736
Length = 723
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 504 APGMLPDPKNTPHRHQLGHRPNRHHIRRYHL 412
AP P P HR + H RHH +R H+
Sbjct: 47 APAPAPAPAPETHRPGIRHPVPRHHRKRPHV 77
>01_06_0074 +
26196923-26197136,26199487-26199635,26199724-26199856,
26199960-26200174
Length = 236
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 350 NHYEYPIQSWTTIPKIEVGTPLVTGALSDVV 258
N Y YP+ S I KI TP V +S +
Sbjct: 90 NDYNYPLMSGVPIEKIRSFTPSVIAKISSTI 120
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 464 VISWAIAQTVTTFAGIISYPFDTVRRRMM 378
VI W+IA +T FA + PF V R M
Sbjct: 193 VIWWSIATALTPFAAKLGLPFLLVTRAFM 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,662,845
Number of Sequences: 37544
Number of extensions: 274918
Number of successful extensions: 922
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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