Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G06
(524 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73) 31 0.58
SB_31971| Best HMM Match : Tyrosinase (HMM E-Value=3e-06) 28 4.1
SB_6063| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_52674| Best HMM Match : Peptidase_A17 (HMM E-Value=3.9e-07) 28 5.4
SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28) 28 5.4
SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_6577| Best HMM Match : E_raikovi_mat (HMM E-Value=4.4) 28 5.4
SB_2509| Best HMM Match : Chordopox_A13L (HMM E-Value=3.6) 28 5.4
SB_36057| Best HMM Match : DUF626 (HMM E-Value=2) 27 7.2
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 27 7.2
SB_10773| Best HMM Match : TatC (HMM E-Value=0.31) 27 7.2
SB_8477| Best HMM Match : Lectin_C (HMM E-Value=1.3e-05) 27 7.2
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 50.8 bits (116), Expect = 7e-07
Identities = 35/92 (38%), Positives = 49/92 (53%)
Frame = -1
Query: 467 IVISWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTP 288
+VIS+ + VT AG+ SYP DT+RRRMM+ A Y+ I I K E
Sbjct: 211 VVISFVLGYGVTVSAGLASYPIDTIRRRMMMTSGEAV---KYKGSIDCTIQILKKEGAMS 267
Query: 287 LVTGALSDVVRAAAGAFVMVLGRLTIKNLLLN 192
L+ GA ++++R AGA V+ G K L +N
Sbjct: 268 LMKGAGANILRGMAGAGVLA-GFDKFKELYVN 298
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = -1
Query: 413 SYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVTGALSDVVR 255
+YP D VRRRM ++ +RA D Y+ + ++++I K+E L G ++++
Sbjct: 179 TYPLDVVRRRMQMKGIRA--DFAYKSTLHAFSSIVKLEGFRGLYKGMWPNILK 229
>SB_31540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 182 RHCVHHH*SQLQFPITSPHSPVIISSLTDATMTFNNTLLALSTIL 48
RH HHH P + H II ++T T+ +T+ ST++
Sbjct: 170 RHLYHHHHQHHYHPTATSHHLFIIFTITSTTIVIISTINTTSTVI 214
>SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73)
Length = 617
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 207 ESPPKY-NAKTLCSPSLISITIPYHLTALPCNHILVN 100
ES PKY T +P L+S++ YH AL H+L N
Sbjct: 127 ESRPKYVQMLTPATPGLMSVSSTYHAAALLSMHVLSN 163
>SB_31971| Best HMM Match : Tyrosinase (HMM E-Value=3e-06)
Length = 364
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 297 WNPPCHGSPLGRGQSCRRCVRDGPWTTDNQESP 199
W+P HG G G+ +R V +GP D+ E P
Sbjct: 154 WSPGPHGIG-GNGEGSKRIVTNGPLRKDSWELP 185
>SB_6063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -3
Query: 495 MLPDPKNTPHRH--QLGHRPNRHHIRRYHLVSIRH 397
M+ + T HRH +L H NRH H V ++H
Sbjct: 15 MITTRETTRHRHSVRLKHNSNRHTTSHKHYVRLKH 49
>SB_52674| Best HMM Match : Peptidase_A17 (HMM E-Value=3.9e-07)
Length = 729
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 501 PGMLPDPKNTPHRHQLGHRPNRHHIRRYHLVSIRHGS*AYDDPVRPGQV 355
PG P+ + + H NR H H++SIRH + PVR G V
Sbjct: 634 PGDSLIPRYLYQQRLVNHFWNRQHKECLHILSIRHIWMKEEVPVRVGDV 682
>SB_39386| Best HMM Match : RVT_1 (HMM E-Value=7.1e-28)
Length = 1239
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 200 LLNTMLRHCVHHH*SQLQFPITSPHSP 120
+LNT+LR C+ H + +T P SP
Sbjct: 218 MLNTLLRECIDRHAPLKRTKVTRPPSP 244
>SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 192 YNAKTLCSPSLISITIPYHLTALPCNHILVNRCNN 88
++ T+C+P+L T+ H CNH L CN+
Sbjct: 79 WSLTTMCNPALT--TMHNHTLTTMCNHTLNTMCNH 111
>SB_6577| Best HMM Match : E_raikovi_mat (HMM E-Value=4.4)
Length = 165
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 180 TLCSPSLISITIPYHLTALPCNHILVNRCNN 88
T+C+P+L ++ + LTA+ CNH L CN+
Sbjct: 8 TMCNPTLTAMC-NHTLTAM-CNHTLTAMCNH 36
>SB_2509| Best HMM Match : Chordopox_A13L (HMM E-Value=3.6)
Length = 375
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 356 CDNHYEYPIQSWTTIPKIEVGTPLVTG 276
CDN YEY W K++ G TG
Sbjct: 233 CDNFYEYACGGWMDRNKLKAGETYKTG 259
>SB_36057| Best HMM Match : DUF626 (HMM E-Value=2)
Length = 401
Score = 27.5 bits (58), Expect = 7.2
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Frame = -3
Query: 519 GFYDTAP----GMLPDP--KNTPHRHQLGHRPNRHHIRRYHLVSIRHGS*AYDDPVRPGQ 358
G Y+ AP G PDP + P + PNR ++ +Y V+ Y+D + G
Sbjct: 208 GDYEVAPSDNRGPTPDPIPQYEPVNNTQTQPPNRRNVTQYEDVTQGSNVTQYEDVTQEGN 267
Query: 357 VRQ-SLRVPHSIMDDH 313
V Q H+ D H
Sbjct: 268 VTQYEAMNRHASRDQH 283
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -1
Query: 428 FAGIISYPFDTVRRRMMI 375
FA +S+PFDT+R++M +
Sbjct: 263 FAHTLSHPFDTIRKKMQL 280
>SB_10773| Best HMM Match : TatC (HMM E-Value=0.31)
Length = 380
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = -1
Query: 230 VLG--RLTIK--NLLLNTMLRHCVHHH*SQLQFPITSPHSPVIISSLTDATMTFNNTLLA 63
VLG RLT + N + N +L+HC++ + FP+ + I ++T+ TF +
Sbjct: 197 VLGQIRLTRRYWNHIRNKLLKHCIYIVLFTVVFPVALRACEMNIPTMTE--KTFETRTVV 254
Query: 62 LSTIL 48
+ST+L
Sbjct: 255 ISTVL 259
>SB_8477| Best HMM Match : Lectin_C (HMM E-Value=1.3e-05)
Length = 332
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 410 YPFDTVRR-RMMIQYVRAKCDNHYEYPIQSW 321
+P+D + ++ I + KCD +EYP + W
Sbjct: 6 HPYDGFKAFQLYISKLNLKCDTFFEYPKKCW 36
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,578,587
Number of Sequences: 59808
Number of extensions: 317772
Number of successful extensions: 1158
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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