Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G06
         (524 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    64   4e-11
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    64   8e-11
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    61   5e-10
Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    60   1e-09
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    56   1e-08
Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical pr...    51   4e-07
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    47   7e-06
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    36   0.018
AF125445-1|AAD12803.2|  550|Caenorhabditis elegans Hypothetical ...    31   0.50 
AL032636-5|CAA21607.2|  500|Caenorhabditis elegans Hypothetical ...    29   2.7  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   3.6  
Z81062-7|CAB02942.1|  755|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AL132952-10|CAB63384.1|  591|Caenorhabditis elegans Hypothetical...    28   4.7  
AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical ...    27   6.2  

>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 64.5 bits (150), Expect = 4e-11
 Identities = 37/78 (47%), Positives = 48/78 (61%)
 Frame = -1

Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
           +WAIAQ VT  +GIISYP+DTVRRRMM+Q  R   D  Y+  +     I K E  + +  
Sbjct: 230 AWAIAQVVTVGSGIISYPWDTVRRRMMMQSGRK--DVLYKNTLDCAVKIIKNEGMSAMFK 287

Query: 278 GALSDVVRAAAGAFVMVL 225
           GALS+V R   GA V+ +
Sbjct: 288 GALSNVFRGTGGALVLAI 305


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 63.7 bits (148), Expect = 8e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)
 Frame = -1

Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
           +WAIAQ VT  +GI+SYP+DTVRRRMM+Q  R   D  Y+  +     I K E  + +  
Sbjct: 230 AWAIAQVVTVGSGILSYPWDTVRRRMMMQSGRK--DVLYKNTLDCAVKIIKNEGMSAMFK 287

Query: 278 GALSDVVRAAAGAFVMVL 225
           GALS+V R   GA V+ +
Sbjct: 288 GALSNVFRGTGGALVLAI 305


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 60.9 bits (141), Expect = 5e-10
 Identities = 36/78 (46%), Positives = 46/78 (58%)
 Frame = -1

Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
           +WAIAQ  T  +G +SYP+DTVRRRMM+Q  R   D  Y+  +     I K E  T L  
Sbjct: 217 TWAIAQVGTVGSGYLSYPWDTVRRRMMMQSGRK--DILYKNTLDCVRKIVKNEGITALYK 274

Query: 278 GALSDVVRAAAGAFVMVL 225
           G LS+V RA  GA V+ +
Sbjct: 275 GGLSNVFRATGGALVLTI 292


>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 34/78 (43%), Positives = 47/78 (60%)
 Frame = -1

Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
           +W IAQ VT  +GI+SYP+DTVRRRMM+Q  R   D  Y+  +     I + E  + +  
Sbjct: 217 AWGIAQVVTVGSGILSYPWDTVRRRMMMQSGRK--DILYKNTLDCAKKIIQNEGMSAMFK 274

Query: 278 GALSDVVRAAAGAFVMVL 225
           GALS+V R   GA V+ +
Sbjct: 275 GALSNVFRGTGGALVLAI 292


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 34/78 (43%), Positives = 47/78 (60%)
 Frame = -1

Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
           +W IAQ VT  +GI+SYP+DTVRRRMM+Q  R K   + ++P       P  E  + +  
Sbjct: 217 AWGIAQVVTVGSGILSYPWDTVRRRMMMQSGR-KDILYKKHPRLRKEDHPN-EGMSAMFK 274

Query: 278 GALSDVVRAAAGAFVMVL 225
           GALS+V R   GA V+ +
Sbjct: 275 GALSNVFRGTGGALVLAI 292


>Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical
           protein R07E3.4 protein.
          Length = 298

 Score = 51.2 bits (117), Expect = 4e-07
 Identities = 28/75 (37%), Positives = 40/75 (53%)
 Frame = -1

Query: 455 WAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVTG 276
           WAIAQ   T +G++ YP DTVRR MM+Q    K    Y      W T+ K +       G
Sbjct: 216 WAIAQISITTSGMVCYPLDTVRRSMMMQ--SGKQIKQYTSTKDCWKTLYKKDGINGFYRG 273

Query: 275 ALSDVVRAAAGAFVM 231
           AL++ +R+  GA ++
Sbjct: 274 ALTNSLRSTGGALII 288


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 31/78 (39%), Positives = 42/78 (53%)
 Frame = -1

Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
           S+AIAQ VT  +  ++YP+DTVRRRMM+     K          +   I   E    L  
Sbjct: 226 SFAIAQGVTVLSSYLTYPWDTVRRRMMV-----KGQLSTSKAFSAARKIVHEEGVRGLYK 280

Query: 278 GALSDVVRAAAGAFVMVL 225
           GAL+++ R+A GA VM L
Sbjct: 281 GALANIFRSAGGALVMAL 298


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 35.9 bits (79), Expect = 0.018
 Identities = 24/78 (30%), Positives = 35/78 (44%)
 Frame = -1

Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
           ++ + Q VT  A + SYP DTVRRR+M+     K    +   I     I   E       
Sbjct: 223 AFLVGQVVTLIAAMTSYPLDTVRRRLMMG--AGKKTLPFNNTISCIKYIYTKEGPKAFFH 280

Query: 278 GALSDVVRAAAGAFVMVL 225
           GAL + +R    A V+ +
Sbjct: 281 GALVNAIRGTGAALVLAI 298


>AF125445-1|AAD12803.2|  550|Caenorhabditis elegans Hypothetical
           protein Y24D9B.1 protein.
          Length = 550

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 510 DTAPGMLPDPKNTPHRHQLGHRPNRHHIRRYH 415
           D  PG  P     PH H   H PN H +   H
Sbjct: 284 DHGPGQAPPDPYQPHGHPAHHIPNPHQLHHQH 315


>AL032636-5|CAA21607.2|  500|Caenorhabditis elegans Hypothetical
           protein Y40B1B.8 protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 446 AQTVT-TFAGIISYPFDTVRRRMMIQYVRAKCDN 348
           AQT +     +I YPF+T+  RM IQ  R   DN
Sbjct: 285 AQTSSMVLTDLILYPFETIVHRMYIQGTRTLIDN 318


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 235 TNAPAAALTTSERAPVTRGVPTS 303
           T +P   L TS  AP T+GVPTS
Sbjct: 385 TPSPTTTLLTSTIAPSTQGVPTS 407


>Z81062-7|CAB02942.1|  755|Caenorhabditis elegans Hypothetical
           protein F15A4.8a protein.
          Length = 755

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 231 GPWTTDNQESPPKYNAKTLCSPSLISITIPYH 136
           GPW   NQ   P   +  +C PS +++ IP++
Sbjct: 239 GPWA--NQYGVPTGPSAPMCDPSKLNLVIPFY 268


>AL132952-10|CAB63384.1|  591|Caenorhabditis elegans Hypothetical
           protein Y51H4A.13 protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = -3

Query: 510 DTAPGMLPDPKNTPHRHQLGHRPNRHHIRRYH 415
           D   G  P     PH H   H PN H +   H
Sbjct: 284 DHCSGQAPPDPYQPHGHPAHHIPNPHQLHHQH 315


>AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical
           protein E02H9.6 protein.
          Length = 460

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 276 SPLGRGQSCRRCVRDGPWT-TDNQESPPKYNAKTLCSP 166
           S LG+G  C R V +G W  + N +  PKY  KT   P
Sbjct: 161 STLGKGLPCGRDV-EGVWKGSRNSKCKPKYTPKTNPKP 197


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,232,046
Number of Sequences: 27780
Number of extensions: 223396
Number of successful extensions: 717
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)