Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G06
         (524 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    94   9e-22
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    94   9e-22
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   0.83 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.5  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   4.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   5.8  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 93.9 bits (223), Expect = 9e-22
 Identities = 49/89 (55%), Positives = 59/89 (66%)
 Frame = -1

Query: 464 VISWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPL 285
           +ISW IAQ VTT AGI+SYPFDTVRRRMM+Q  RAK +  Y+  +  W TI K E G   
Sbjct: 213 LISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAF 272

Query: 284 VTGALSDVVRAAAGAFVMVLGRLTIKNLL 198
             GA S+++R   GA V+VL    IKNLL
Sbjct: 273 FKGAFSNILRGTGGALVLVLYD-EIKNLL 300



 Score = 40.3 bits (90), Expect = 1e-05
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 522 FGFYDTAPGMLPDPKNTP 469
           FGFYDTA GMLPDPK TP
Sbjct: 194 FGFYDTARGMLPDPKKTP 211


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 93.9 bits (223), Expect = 9e-22
 Identities = 49/89 (55%), Positives = 59/89 (66%)
 Frame = -1

Query: 464 VISWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPL 285
           +ISW IAQ VTT AGI+SYPFDTVRRRMM+Q  RAK +  Y+  +  W TI K E G   
Sbjct: 213 LISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAF 272

Query: 284 VTGALSDVVRAAAGAFVMVLGRLTIKNLL 198
             GA S+++R   GA V+VL    IKNLL
Sbjct: 273 FKGAFSNILRGTGGALVLVLYD-EIKNLL 300



 Score = 40.3 bits (90), Expect = 1e-05
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 522 FGFYDTAPGMLPDPKNTP 469
           FGFYDTA GMLPDPK TP
Sbjct: 194 FGFYDTARGMLPDPKKTP 211


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 24.2 bits (50), Expect = 0.83
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 504 APGMLPDPKNTPHRHQLGHRPN 439
           APG  P P  +P   Q G  PN
Sbjct: 20  APGPQPSPHQSPQAPQRGSPPN 41


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 471 PHRHQLGHRPNRHHIRRYH 415
           PH H +GH  +  H   +H
Sbjct: 414 PHHHTMGHGHSHIHATPHH 432


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 489 PDPKNTPHRHQLGHRPNRHHIRRYHLVS 406
           P P+ TP   +   R  R    RY+ VS
Sbjct: 394 PPPRQTPPSRKESGRRRRRRTPRYNSVS 421


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +2

Query: 308 WEWSSMIEWGTRNDCRTWPGRTGSSYAYEP 397
           W+  S I  GT      +P   G    YEP
Sbjct: 155 WKNPSRIVGGTNTGINEFPMMAGIKRTYEP 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,196
Number of Sequences: 438
Number of extensions: 2836
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)