Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G06
(524 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56450.1 68418.m07046 mitochondrial substrate carrier family ... 55 3e-08
At5g13490.1 68418.m01556 ADP, ATP carrier protein 2, mitochondri... 50 1e-06
At4g28390.1 68417.m04063 ADP, ATP carrier protein, mitochondrial... 50 1e-06
At3g08580.2 68416.m00996 ADP, ATP carrier protein 1, mitochondri... 50 1e-06
At3g08580.1 68416.m00995 ADP, ATP carrier protein 1, mitochondri... 50 1e-06
At5g17400.1 68418.m02041 ADP, ATP carrier protein, mitochondrial... 44 5e-05
At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transport... 29 1.9
At3g28890.1 68416.m03606 leucine-rich repeat family protein cont... 29 2.5
At1g03750.1 68414.m00355 helicase, putative similar to SP|Q03468... 28 3.3
At3g28770.1 68416.m03591 expressed protein 28 4.4
At5g24900.1 68418.m02948 cytochrome P450 family protein similar ... 27 5.8
At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger) fa... 27 5.8
At3g29750.1 68416.m03756 hypothetical protein 27 5.8
At4g12210.1 68417.m01938 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger) fa... 27 7.7
At3g24880.1 68416.m03120 expressed protein 27 7.7
At2g38290.2 68415.m04703 ammonium transporter 2 (AMT2) identical... 27 7.7
At2g38290.1 68415.m04704 ammonium transporter 2 (AMT2) identical... 27 7.7
>At5g56450.1 68418.m07046 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 330
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/76 (39%), Positives = 41/76 (53%)
Frame = -1
Query: 455 WAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVTG 276
W +AQ VTT AG+ SYP DTVRRR+M+Q Y + W I + E G
Sbjct: 243 WGLAQAVTTSAGLASYPLDTVRRRIMMQ--SGMEHPMYRSTLDCWKKIYRSEGLASFYRG 300
Query: 275 ALSDVVRAAAGAFVMV 228
ALS++ R+ A ++V
Sbjct: 301 ALSNMFRSTGSAAILV 316
>At5g13490.1 68418.m01556 ADP, ATP carrier protein 2, mitochondrial
/ ADP/ATP translocase 2 / adenine nucleotide
translocator 2 (ANT2) identical to SWISS-PROT:P40941
ADP,ATP carrier protein 2, mitochondrial precursor
(Adenine nucleotide translocator 2) [Arabidopsis
thaliana]
Length = 385
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/76 (39%), Positives = 44/76 (57%)
Frame = -1
Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
S+A+ +T AG+ SYP DTVRRRMM+ A Y+ +++ I K E L
Sbjct: 293 SFALGWLITNGAGLASYPIDTVRRRMMMTSGEAV---KYKSSFDAFSQIVKKEGAKSLFK 349
Query: 278 GALSDVVRAAAGAFVM 231
GA ++++RA AGA V+
Sbjct: 350 GAGANILRAVAGAGVL 365
>At4g28390.1 68417.m04063 ADP, ATP carrier protein, mitochondrial,
putative / ADP/ATP translocase, putative / adenine
nucleotide translocator, putative similar to
mitochondrial ADP,ATP carrier protein SP:P12857 from
[Zea mays]
Length = 379
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = -1
Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
S+ + +T AG+ SYP DTVRRRMM+ A Y+ +Q+++ I K E L
Sbjct: 287 SFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAV---KYKSSLQAFSQIVKNEGAKSLFK 343
Query: 278 GALSDVVRAAAGAFVM 231
GA ++++RA AGA V+
Sbjct: 344 GAGANILRAVAGAGVL 359
>At3g08580.2 68416.m00996 ADP, ATP carrier protein 1, mitochondrial
/ ADP/ATP translocase 1 / adenine nucleotide
translocator 1 (ANT1) identical to SWISS-PROT:P31167
ADP,ATP carrier protein 1 (Adenine nucleotide
translocator 1) [Arabidopsis thaliana]
Length = 381
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/76 (39%), Positives = 44/76 (57%)
Frame = -1
Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
S+A+ +T AG+ SYP DTVRRRMM+ A Y+ + ++ I K E L
Sbjct: 289 SFALGWVITNGAGLASYPIDTVRRRMMMTSGEAV---KYKSSLDAFKQILKNEGAKSLFK 345
Query: 278 GALSDVVRAAAGAFVM 231
GA ++++RA AGA V+
Sbjct: 346 GAGANILRAVAGAGVL 361
>At3g08580.1 68416.m00995 ADP, ATP carrier protein 1, mitochondrial
/ ADP/ATP translocase 1 / adenine nucleotide
translocator 1 (ANT1) identical to SWISS-PROT:P31167
ADP,ATP carrier protein 1 (Adenine nucleotide
translocator 1) [Arabidopsis thaliana]
Length = 381
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/76 (39%), Positives = 44/76 (57%)
Frame = -1
Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
S+A+ +T AG+ SYP DTVRRRMM+ A Y+ + ++ I K E L
Sbjct: 289 SFALGWVITNGAGLASYPIDTVRRRMMMTSGEAV---KYKSSLDAFKQILKNEGAKSLFK 345
Query: 278 GALSDVVRAAAGAFVM 231
GA ++++RA AGA V+
Sbjct: 346 GAGANILRAVAGAGVL 361
>At5g17400.1 68418.m02041 ADP, ATP carrier protein, mitochondrial,
putative / ADP/ATP translocase, putative / adenine
nucleotide translocator, putative similar to
SWISS-PROT:Q09188 ADP,ATP carrier protein (ADP/ATP
translocase) [Schizosaccharomyces pombe]; contains Pfam
profile: PF00153 mitochondrial carrier protein
Length = 306
Score = 44.4 bits (100), Expect = 5e-05
Identities = 27/76 (35%), Positives = 42/76 (55%)
Frame = -1
Query: 458 SWAIAQTVTTFAGIISYPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGTPLVT 279
S+ + ++TT AG+I+YPFDT+RRRMM+ + Y I + I K E L
Sbjct: 218 SFLLGWSITTSAGVIAYPFDTLRRRMMLTSGQPV---KYRNTIHALREILKSEGFYALYR 274
Query: 278 GALSDVVRAAAGAFVM 231
G ++++ AGA V+
Sbjct: 275 GVTANMLLGVAGAGVL 290
>At2g47000.1 68415.m05871 multidrug resistant (MDR) ABC transporter,
putative similar to multidrug-resistant protein CjMDR1
[Coptis japonica] GI:14715462, MDR-like p-glycoprotein
[Arabidopsis thaliana] GI:24324262; contains Pfam
profiles PF00005: ABC transporter, PF00664: ABC
transporter transmembrane region
Length = 1286
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Frame = -1
Query: 455 WAIAQTVTTFAGIISYP----FDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEVGT 291
WAI V FA II+YP F + ++Q +R+ C + W P+ GT
Sbjct: 762 WAIIFMVLGFASIIAYPAQTFFFAIAGCKLVQRIRSMCFEKVVHMEVGWFDEPENSSGT 820
>At3g28890.1 68416.m03606 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-0B
[Lycopersicon esculentum] gi|3894387|gb|AAC78593
Length = 711
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 159 ISITIPYHLTALPCNHILVNRCNN-DFQ*HPSSFINYFTLDIHHKKLKYT 13
I+ T P+ LT+LP +LV R N H +SF+ +DI H T
Sbjct: 419 INDTFPFWLTSLPKLQVLVLRSNAFHGPIHEASFLKLRIIDISHNHFNGT 468
>At1g03750.1 68414.m00355 helicase, putative similar to SP|Q03468
Excision repair protein ERCC-6 (Cockayne syndrome
protein CSB) {Homo sapiens}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF02810: SEC-C motif
Length = 862
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 294 NPPCHGSPLGRGQSCRRCVRDG 229
NP GSPL + + CRR V DG
Sbjct: 420 NPCACGSPLKQSECCRRIVPDG 441
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 198 EEILDCQSSKDHH--ERTGGSSDHVREGSRD 284
+E+ + SKD + ER GG D ++EGS D
Sbjct: 1626 KEVSTEEGSKDSNIVERNGGKEDSIKEGSED 1656
>At5g24900.1 68418.m02948 cytochrome P450 family protein similar to
Cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
fatty acid omega-hydroxylase cytochrome P450 4A11 - Homo
sapiens, PIR:I53015
Length = 525
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 355 HLARTYWIIIRLRTVSNGYEMIPANVVTVWAMAQLMTMRGV 477
H W I+ + S GY + VV W M + + ++GV
Sbjct: 7 HTVNAIWCIVIVGIFSVGYHVYGRAVVEQWRMRRSLKLQGV 47
>At4g12190.1 68417.m01936 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 71
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 180 TLCSPSLISITIPYHLTALPCNHILVNRC 94
++C SL+S P +T + C+H+ N C
Sbjct: 23 SICLESLVSGPKPRDITRMTCSHVFHNGC 51
>At3g29750.1 68416.m03756 hypothetical protein
Length = 421
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 410 YPFDTVRRRMMIQYVRAKCDNHYEYPIQSWTTIPKIEV 297
+PF TV R+MI++ + H E + W + K +V
Sbjct: 364 HPFKTVVSRLMIEFGKEVTQMHVEEMVDKWESSVKKKV 401
>At4g12210.1 68417.m01938 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 203
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 180 TLCSPSLISITIPYHLTALPCNHILVNRC 94
++C +L+S P LT + C+H+ N C
Sbjct: 154 SICLENLVSGPKPSDLTRMTCSHVFHNPC 182
>At4g05350.1 68417.m00817 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHG1a [Arabidopsis thaliana] GI:3822225; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 206
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 180 TLCSPSLISITIPYHLTALPCNHILVNRC 94
++C SL+S P +T + C+H+ N C
Sbjct: 158 SICLESLVSGPKPRDVTRMTCSHVFHNGC 186
>At3g24880.1 68416.m03120 expressed protein
Length = 1957
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = -3
Query: 507 TAPGMLPDPKNTPHRHQLGHRPNRHHIRRYHLVSIRHGS*AYDDPVRPGQVRQSLRVPHS 328
++P + P + H+H L H+ R+ ++ ++H + + Q + RVP S
Sbjct: 1761 SSPSIAPAVAPSNHQHLLIHQKQRNQVQSTAQRVVQHNHLGNSELSKKSQAERMPRVPQS 1820
Query: 327 I 325
+
Sbjct: 1821 V 1821
>At2g38290.2 68415.m04703 ammonium transporter 2 (AMT2) identical to
SP|Q9M6N7 Ammonium transporter 2 (AtAMT2) {Arabidopsis
thaliana}
Length = 359
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 323 WTTIPKIEVGTPLVTGALSDVVRAAAG 243
WTT+ I G P V GA+ +V AG
Sbjct: 149 WTTLDVIFFGKPSVIGAIQGMVTGLAG 175
>At2g38290.1 68415.m04704 ammonium transporter 2 (AMT2) identical to
SP|Q9M6N7 Ammonium transporter 2 (AtAMT2) {Arabidopsis
thaliana}
Length = 475
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 323 WTTIPKIEVGTPLVTGALSDVVRAAAG 243
WTT+ I G P V GA+ +V AG
Sbjct: 265 WTTLDVIFFGKPSVIGAIQGMVTGLAG 291
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,572,574
Number of Sequences: 28952
Number of extensions: 203597
Number of successful extensions: 625
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 967280384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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