Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G04
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    26   0.28 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.5  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +3

Query: 375 QKQPESVKKVLRHYADKKSK 434
           QKQ E+ +KV+RH   K+++
Sbjct: 79  QKQKETAEKVIRHLTQKRAR 98


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 164 AQIL*YQLEKECIQTHNFFQLNIGSVHLALERF*RLPVPF 45
           +Q+L +  E +  +TH  F LNI S  + +E   + P P+
Sbjct: 362 SQLLRHVEESDKQRTHQPFLLNIPSEGIKVEPRDKAPSPY 401


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 585 HSQQGQALMLPIEGHP 538
           HS+Q  AL+ P +G P
Sbjct: 245 HSKQNVALLCPAQGFP 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,381
Number of Sequences: 336
Number of extensions: 2220
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)