Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_G04
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890... 92 4e-19
07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615... 89 3e-18
03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631... 89 3e-18
01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637... 36 0.033
06_03_0397 + 20370146-20370256,20371223-20371312,20371411-203714... 33 0.23
02_02_0200 - 7718760-7718816,7718910-7719011,7719643-7719726,771... 29 2.1
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 29 2.8
01_01_0747 - 5773771-5773863,5773960-5774061,5774527-5774610,577... 29 3.7
05_02_0097 - 6573093-6573254,6573297-6573398,6573922-6574005,657... 28 5.0
05_03_0281 + 11560402-11560569,11561373-11561579,11562966-115631... 28 6.5
01_02_0071 + 10822008-10822011,10822219-10822364,10822452-108225... 28 6.5
08_02_0695 + 20122838-20122949,20123238-20123335,20123520-201236... 27 8.7
>07_03_1580 +
27888275-27888360,27888755-27888871,27888964-27889045,
27889710-27889821,27889958-27890071,27890163-27890326
Length = 224
Score = 91.9 bits (218), Expect = 4e-19
Identities = 43/72 (59%), Positives = 50/72 (69%)
Frame = +3
Query: 387 ESVKKVLRHYADKKSKKPALIAKSSXILDVXPWDDETDMKEMENQVRTIEMDGLLWGASK 566
E K A K S K KSS +LDV PWDDETDMK++E VR+++M+GL WGASK
Sbjct: 113 EDKKAADERAASKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASK 172
Query: 567 LVPVGYGINKLQ 602
LVPVGYGI KLQ
Sbjct: 173 LVPVGYGIKKLQ 184
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +2
Query: 59 DVKTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASLPHVLRWYSHIAS 229
D+ TA GL L Q+L+ ++YVSG S+ DIKVF V P A P+ RWY +A+
Sbjct: 7 DLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAA 63
>07_03_1260 -
25260872-25261101,25261199-25261312,25261473-25261596,
25261755-25261839,25261917-25262033,25262122-25262207
Length = 251
Score = 89.0 bits (211), Expect = 3e-18
Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = +3
Query: 378 KQPESVKKVL--RHYADKKSKKPALIAKSSXILDVXPWDDETDMKEMENQVRTIEMDGLL 551
++ E KK R A K S K KSS +LDV PWDDETDM ++E VR ++M+GLL
Sbjct: 113 EETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLL 172
Query: 552 WGASKLVPVGYGINKLQ 602
WGASKLVPVGYGI KLQ
Sbjct: 173 WGASKLVPVGYGIKKLQ 189
Score = 54.4 bits (125), Expect = 7e-08
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +2
Query: 59 DVKTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASLPHVLRWYSHI 223
+V + GL +L++YL RSY+SGY S D+ V+ P++S +V RW++HI
Sbjct: 7 NVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHI 61
>03_04_0016 +
16461542-16461566,16462701-16462732,16463015-16463100,
16463189-16463305,16463399-16463474,16463695-16463818,
16464482-16464595,16464700-16464947
Length = 273
Score = 89.0 bits (211), Expect = 3e-18
Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = +3
Query: 378 KQPESVKKVL--RHYADKKSKKPALIAKSSXILDVXPWDDETDMKEMENQVRTIEMDGLL 551
++ E KK R A K S K KSS +LDV PWDDETDM ++E VR ++M+GLL
Sbjct: 129 EETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLL 188
Query: 552 WGASKLVPVGYGINKLQ 602
WGASKLVPVGYGI KLQ
Sbjct: 189 WGASKLVPVGYGIKKLQ 205
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +2
Query: 47 MALGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASLPHVLRWYSHIA 226
+ L +V + GL +L++YL RSY+SGY S+ D+ VF + PAAS +V RWY HI+
Sbjct: 22 ITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHIS 81
Query: 227 S 229
+
Sbjct: 82 A 82
>01_06_1167 -
35062766-35062870,35063165-35063228,35063647-35063738,
35064137-35064205,35064322-35064412,35064509-35064732,
35065064-35065180,35065583-35065651,35066172-35066237,
35066335-35066505,35066581-35066661,35067620-35067700
Length = 409
Score = 35.5 bits (78), Expect = 0.033
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 9/57 (15%)
Frame = +2
Query: 80 LNELNQYLAERSYV--SGYTPSQADIKVFEQV-------GKVPAASLPHVLRWYSHI 223
L LNQ L+++S + +G+ PS ADI VF + G+ PHVLRW +I
Sbjct: 76 LGNLNQDLSQKSVLLGNGFKPSVADIVVFATIQVFVSHLGENELQKYPHVLRWMDYI 132
>06_03_0397 +
20370146-20370256,20371223-20371312,20371411-20371470,
20371553-20371825,20371917-20371991,20372074-20372130,
20372820-20372960,20373066-20373116,20373194-20373289,
20373482-20373565,20375739-20375840,20376260-20376331
Length = 403
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 303 LLHXXXXXXXXXSIFLALVMRKRMQKQPESVKKVLRHYADKKSKKPALIAK 455
L H +FL LVM + PES+ +VL+HY D K + P + K
Sbjct: 127 LKHCFFSTTSRDELFLNLVM----EFVPESLYRVLKHYKDMKQRMPLIYVK 173
>02_02_0200 -
7718760-7718816,7718910-7719011,7719643-7719726,
7719821-7719916,7720016-7720066,7720162-7720302,
7720717-7720773,7720864-7720938,7721033-7721305,
7721382-7721441,7721531-7721620,7722519-7722638
Length = 401
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 303 LLHXXXXXXXXXSIFLALVMRKRMQKQPESVKKVLRHYADKKSKKPALIAK 455
L H +FL LVM + PES+ +VL+HY++ + P + K
Sbjct: 130 LKHCFFSTTSRDELFLNLVM----EFVPESLYRVLKHYSNMNQRMPLIYVK 176
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = +2
Query: 71 AQGLNELNQYLAERSYVSGYTPSQADIKVFEQV---GKVPAASL----PHVLRWYSHIAS 229
AQ L+ + +LA Y++G S AD + K P A L PHV W+ I+S
Sbjct: 145 AQVLDVYDAHLAGSRYLAGNRFSLADANHMSYLLFLSKTPMAELVASRPHVKAWWDDISS 204
Query: 230 YTPAERKT 253
PA +KT
Sbjct: 205 -RPAWKKT 211
>01_01_0747 -
5773771-5773863,5773960-5774061,5774527-5774610,
5774777-5774872,5774950-5775000,5775105-5775245,
5775704-5775760,5775845-5775919,5776005-5776277,
5776371-5776430,5776969-5777061,5777227-5777298
Length = 398
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 303 LLHXXXXXXXXXSIFLALVMRKRMQKQPESVKKVLRHYADKKSKKPALIAK 455
L H +FL LVM + PE++ +VL+HY++ + P + K
Sbjct: 115 LKHCFFSTTSRDELFLNLVM----EYVPETLYRVLKHYSNANQRMPLIYVK 161
>05_02_0097 -
6573093-6573254,6573297-6573398,6573922-6574005,
6574190-6574285,6574373-6574423,6574537-6574677,
6575025-6575081,6575163-6575237,6575323-6575595,
6575689-6575748,6576184-6576285,6576377-6576451
Length = 425
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 303 LLHXXXXXXXXXSIFLALVMRKRMQKQPESVKKVLRHYADKKSKKPALIAK 455
L H +FL LVM + PE++ +VL+HY++ + P + K
Sbjct: 119 LKHCFFSTTSRDELFLNLVM----EYVPETLYRVLKHYSNANHRMPLIYVK 165
>05_03_0281 +
11560402-11560569,11561373-11561579,11562966-11563174,
11563261-11563309,11563611-11563673,11563799-11565472
Length = 789
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 360 MRKRMQKQPESVKKVLRHYADKKSKKPALIAKSSXILDVXPWDDETDMKEMENQVRTIEM 539
+ R+Q++ + KVL + S+ P + S + P D+ + +Q+R +
Sbjct: 394 LASRLQQRSKGSVKVLHSARPRPSENPESVPPVSSSPQMWPTPDQGLLHSSSSQLRIVRE 453
Query: 540 DGLLWGA-SKLVPVGYGINKLQ 602
+G++ A S P G N+++
Sbjct: 454 NGIMSSADSAWNPGGGASNRMK 475
>01_02_0071 +
10822008-10822011,10822219-10822364,10822452-10822544,
10822722-10822781,10822855-10823127,10823229-10823303,
10823419-10823475,10823593-10823733,10823813-10823863,
10823905-10823955,10823956-10824051,10824159-10824242,
10824330-10824432,10824518-10824600
Length = 438
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +3
Query: 210 GTATSHRTPLLNAKPGQRELAH*QLELNPRP--LLHXXXXXXXXXSIFLALVMRKRMQKQ 383
G + + L +A+ REL Q+ +P L H ++L LV+ +
Sbjct: 108 GERVAVKKVLQDARYKNRELQTMQVLDHPNVACLKHYFCSTTAKEELYLNLVL----EYV 163
Query: 384 PESVKKVLRHYADKKSKKPALIAK 455
PE+V +V+RHY + P + K
Sbjct: 164 PETVHRVIRHYNKMSQRMPLIYVK 187
>08_02_0695 +
20122838-20122949,20123238-20123335,20123520-20123696,
20123790-20123890,20124049-20124124,20124213-20124272,
20124362-20124546,20124638-20124734,20124817-20124903,
20124989-20125047,20125157-20125248,20125436-20125513,
20125617-20125777,20125880-20126098
Length = 533
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 95 QYLAERSYVSGYTPSQADIKVFEQVGKVPAASLPHV 202
QY E + V+GY P + F + VP AS P V
Sbjct: 441 QYFNEYTSVAGYGPVHTGARWFNDMINVPFASKPFV 476
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,043,068
Number of Sequences: 37544
Number of extensions: 231302
Number of successful extensions: 580
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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