Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G04
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   103   7e-23
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   100   7e-22
AF077536-1|AAK31411.2|  643|Caenorhabditis elegans Hypothetical ...    31   0.63 
Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p4...    29   3.4  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  103 bits (248), Expect = 7e-23
 Identities = 47/70 (67%), Positives = 57/70 (81%)
 Frame = +3

Query: 393 VKKVLRHYADKKSKKPALIAKSSXILDVXPWDDETDMKEMENQVRTIEMDGLLWGASKLV 572
           V++ L  YA+KK+KK   IAKSS ILDV PWDDETD+ EME  VR+IEMDGL+WG +KL+
Sbjct: 106 VEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLI 165

Query: 573 PVGYGINKLQ 602
           P+GYGI KLQ
Sbjct: 166 PIGYGIKKLQ 175



 Score = 70.1 bits (164), Expect = 1e-12
 Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = +2

Query: 53  LGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASL-PHVLRWYSHIAS 229
           + DVK+  GL   N  LAE+++ +G+  S  D ++F  +G  P AS  P+V RWY+++AS
Sbjct: 2   VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61

Query: 230 YTPAERKTWS 259
           YT AERKTW+
Sbjct: 62  YTDAERKTWA 71


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  100 bits (240), Expect = 7e-22
 Identities = 46/76 (60%), Positives = 59/76 (77%)
 Frame = +3

Query: 375 QKQPESVKKVLRHYADKKSKKPALIAKSSXILDVXPWDDETDMKEMENQVRTIEMDGLLW 554
           +++ + V++ L  YA KK+ K   IAKSS ILDV PWDDETD+ EME  VR+IEMDGL+W
Sbjct: 150 EEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVW 209

Query: 555 GASKLVPVGYGINKLQ 602
           G +KL+P+GYGI KLQ
Sbjct: 210 GGAKLIPIGYGIKKLQ 225


>AF077536-1|AAK31411.2|  643|Caenorhabditis elegans Hypothetical
           protein C16A11.5 protein.
          Length = 643

 Score = 31.1 bits (67), Expect = 0.63
 Identities = 16/47 (34%), Positives = 28/47 (59%)
 Frame = +3

Query: 387 ESVKKVLRHYADKKSKKPALIAKSSXILDVXPWDDETDMKEMENQVR 527
           E VKK L+   +K++K    +++    LDV    +E ++KEME+ +R
Sbjct: 448 EDVKKELKTSQNKENKMRKKVSELEKKLDVENVQNEQEVKEMEDDLR 494


>Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical
           protein C36A4.6 protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 77  GLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPA 184
           G+N+LNQ L + +Y +G+  +++ I      GK+ A
Sbjct: 117 GMNQLNQSLLQNTYATGWKHTRSAIAPIFSTGKMKA 152


>AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p450
           family protein 25A5 protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 77  GLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPA 184
           G+N+LNQ L + +Y +G+  +++ +      GK+ A
Sbjct: 93  GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,844,233
Number of Sequences: 27780
Number of extensions: 201805
Number of successful extensions: 603
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)