Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_G03
         (595 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U54999-1|AAB40385.1|  677|Homo sapiens LGN protein protein.            30   5.4  
CR456786-1|CAG33067.1|  677|Homo sapiens GPSM2 protein.                30   5.4  
BC027732-1|AAH27732.1|  677|Homo sapiens G-protein signaling mod...    30   5.4  
AY136740-1|AAN01266.1|  677|Homo sapiens LGN protein protein.          30   5.4  
AL449266-9|CAI14361.1|  684|Homo sapiens G-protein signalling mo...    30   5.4  
AL449266-8|CAI14360.1|  213|Homo sapiens G-protein signalling mo...    30   5.4  

>U54999-1|AAB40385.1|  677|Homo sapiens LGN protein protein.
          Length = 677

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 286 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 381
           + Q  +  +YLHDY+    Y++H LT  + +G
Sbjct: 58  YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 89


>CR456786-1|CAG33067.1|  677|Homo sapiens GPSM2 protein.
          Length = 677

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 286 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 381
           + Q  +  +YLHDY+    Y++H LT  + +G
Sbjct: 58  YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 89


>BC027732-1|AAH27732.1|  677|Homo sapiens G-protein signaling
           modulator 2 (AGS3-like, C. elegans) protein.
          Length = 677

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 286 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 381
           + Q  +  +YLHDY+    Y++H LT  + +G
Sbjct: 58  YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 89


>AY136740-1|AAN01266.1|  677|Homo sapiens LGN protein protein.
          Length = 677

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 286 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 381
           + Q  +  +YLHDY+    Y++H LT  + +G
Sbjct: 58  YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 89


>AL449266-9|CAI14361.1|  684|Homo sapiens G-protein signalling
           modulator 2 (AGS3-like, C. elegans) protein.
          Length = 684

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 286 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 381
           + Q  +  +YLHDY+    Y++H LT  + +G
Sbjct: 65  YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 96


>AL449266-8|CAI14360.1|  213|Homo sapiens G-protein signalling
           modulator 2 (AGS3-like, C. elegans) protein.
          Length = 213

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 286 HCQSASMSYYLHDYSLNAHYYYHHLTYNKWLG 381
           + Q  +  +YLHDY+    Y++H LT  + +G
Sbjct: 65  YSQLGNAYFYLHDYAKALEYHHHDLTLARTIG 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,265,914
Number of Sequences: 237096
Number of extensions: 2047934
Number of successful extensions: 3199
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3195
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)