Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F24
(437 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49882| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 29 2.2
SB_5628| Best HMM Match : Complex1_LYR (HMM E-Value=3e-13) 28 2.9
SB_40696| Best HMM Match : DUF1096 (HMM E-Value=5.5) 28 3.9
SB_2344| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_26228| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_14030| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_53655| Best HMM Match : COLFI (HMM E-Value=0.31) 27 8.9
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 27 8.9
>SB_49882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = -3
Query: 360 NWHTIANSWNSISHIRTNSWLDKRQCFHSGNIALSKHIYLDDCSILGFTEIHYNKTSK 187
NWH+I SW S S R +++D Q L K I ILG + Y T++
Sbjct: 464 NWHSIGASWESSSG-RLKAFVDGNQIKDQDAFQLGKEIPGHGLLILGQEQDSYGFTAQ 520
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -3
Query: 426 IKDSFHGFSYSNARTFT*IAWSNWHTIANSWNSISHIRTNSWLDKRQCF 280
+ S G S+ N R F WS+W+ ++ + S +T + +K++C+
Sbjct: 314 VSSSVPGHSWPNYREFETDLWSDWY---GTYGTKSKYKTKGFRNKKRCW 359
>SB_5628| Best HMM Match : Complex1_LYR (HMM E-Value=3e-13)
Length = 487
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 351 TIANSWN-SISHIRTNSWLDKRQCFHSGNIALSKHIYLDDCSILGFTE 211
T+ +W+ SI+ +W +RQ + I+ S ++ DC+ L T+
Sbjct: 95 TVTATWSKSINRTTQQTWQHERQQIRNREISYSTEVHSQDCACLTETK 142
>SB_40696| Best HMM Match : DUF1096 (HMM E-Value=5.5)
Length = 582
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 372 IAWSNWHTIANSWNSISHIRTNSWLDKRQCFHSGN 268
IA S W IA+SW + I+T ++ Q SGN
Sbjct: 484 IAVSPWRVIASSWQDLGRIKTQTY----QMHFSGN 514
>SB_2344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 27.5 bits (58), Expect = 5.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 431 KGLRTVFMALVIPTHVPLHKLPGATGIQLLTAGIVYLTLGPI 306
KGL+ + +V LH LPGA+ L + Y TL P+
Sbjct: 26 KGLKPMDHGGTSDPYVKLHLLPGASKSNKLRSHTKYKTLNPV 67
>SB_26228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 27.1 bits (57), Expect = 6.8
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -1
Query: 278 TAVTLHCLNIFTWMTAVSW 222
T T+HC+ ++TW+ AVS+
Sbjct: 851 TLKTVHCMILYTWIHAVSF 869
>SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Frame = -3
Query: 348 IANSWNSISHIRTNSWLDKRQCFHSG-----NIALSKHI 247
++N+W+++ HIRT++ +C G N L+KH+
Sbjct: 415 LSNNWDTVRHIRTHTGYQPFKCTQCGKAFAHNSDLTKHM 453
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 27.1 bits (57), Expect = 6.8
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3
Query: 399 YSNARTFT*IAWSNWHTIANSWNSISHIRTNSWLDKRQCFHSGNIALS---KHIYLDDCS 229
Y A T +WSNW + + S S +RT R C +GN++ S K++ + +C
Sbjct: 893 YQRACPSTWSSWSNWTSCSVSCGSGVQVRT------RSCEKAGNVSDSCPGKNVEMKECI 946
Query: 228 I 226
+
Sbjct: 947 V 947
>SB_14030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 26.6 bits (56), Expect = 8.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 159 SFDCIFIGYILTSCCNVFL 215
SFDCI+ ++ S CN+ L
Sbjct: 145 SFDCIYCSNLIVSACNLVL 163
>SB_53655| Best HMM Match : COLFI (HMM E-Value=0.31)
Length = 74
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -1
Query: 296 IKDNASTAVTLHCLNIFTWMTAVSWGLQKYITTRRQN 186
+ D AS +T HC N W + S K I + N
Sbjct: 16 LSDRASQKITYHCRNSVAWYDSRSRDFDKSIKLKSGN 52
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +1
Query: 259 QCNVTAVEALSFIQPTIGPNVRYTIPAVSNCMPVAPGNLCKGTC-VGITKAMK 414
+C ++ + PTI P V + C+ A G + KG C + K +K
Sbjct: 214 ECMTGYKNCMAVLVPTIPPFVIACKDNLKQCVATADGFIAKGKCFIAFAKCLK 266
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,767,821
Number of Sequences: 59808
Number of extensions: 203685
Number of successful extensions: 495
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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