Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F24
         (437 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical pr...    35   0.030
Z19152-3|CAA79537.1|   82|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec...    28   2.6  
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l...    28   2.6  
Z78537-1|CAB01719.1|  182|Caenorhabditis elegans Hypothetical pr...    27   4.5  
U97000-10|AAC47997.1|  530|Caenorhabditis elegans Hypothetical p...    27   6.0  
U23521-4|AAC46816.4|  389|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK858.6 protein.
          Length = 619

 Score = 34.7 bits (76), Expect = 0.030
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = -1

Query: 389 HVPLHKLPGATGIQLLTAGIVYLTLGPIVGWIKDNASTAVTLH 261
           H+ +  LP AT I    +G VY  LG  +GWI DNA   +  H
Sbjct: 127 HLIVDNLPVATVINPAQSGDVYYDLGYRLGWIGDNAKVFLNNH 169


>Z19152-3|CAA79537.1|   82|Caenorhabditis elegans Hypothetical
          protein B0464.3 protein.
          Length = 82

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 96 CFFFHLSFVISVLFSF*CI 40
          C FF + F++SV+F+F CI
Sbjct: 22 CIFFGVLFILSVIFNFVCI 40


>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
            protein 2 protein.
          Length = 1338

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 314  GPIVGWIKDNASTAVTLHCLNIFTWMTAVSWG 219
            G I+GW+K +A+    L    IF ++TAV  G
Sbjct: 1078 GRIIGWLKGSATLLCLLGITWIFGFLTAVKGG 1109


>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
            protein LAT-2 protein.
          Length = 1338

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 314  GPIVGWIKDNASTAVTLHCLNIFTWMTAVSWG 219
            G I+GW+K +A+    L    IF ++TAV  G
Sbjct: 1078 GRIIGWLKGSATLLCLLGITWIFGFLTAVKGG 1109


>Z78537-1|CAB01719.1|  182|Caenorhabditis elegans Hypothetical
           protein C09F12.1 protein.
          Length = 182

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 360 NWHTIANSWNSISHIRTNSW 301
           +W+T+ N+   I+HI T+ W
Sbjct: 30  SWNTVENNVKDITHINTSEW 49


>U97000-10|AAC47997.1|  530|Caenorhabditis elegans Hypothetical
           protein F21F8.11 protein.
          Length = 530

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 196 LVVMYFCKPQDTAVIQVNMFRQCNVTAVEALSFIQPTIGPNVRYTI 333
           L+  +FC  Q TA I +++   CN TAV  ++    T+      TI
Sbjct: 31  LMYAFFCMCQMTAHIGLSLSCMCNSTAVALMNTNNATLVEGTESTI 76


>U23521-4|AAC46816.4|  389|Caenorhabditis elegans Hypothetical
           protein F41C3.11 protein.
          Length = 389

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
 Frame = -1

Query: 269 TLHC--LNIFTWMTAVSWGLQKYIT--TRRQNI 183
           T+ C  LNI T+ T   WG Q+YI   T R N+
Sbjct: 182 TIKCVSLNIDTYKTGYEWGKQEYINILTLRANL 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,238,077
Number of Sequences: 27780
Number of extensions: 160140
Number of successful extensions: 438
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)