Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F22
(597 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 58 4e-09
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 51 7e-07
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 31 0.47
AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical ... 30 1.1
AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical ... 29 3.3
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical ... 28 4.4
AC006769-16|AAF60588.2| 338|Caenorhabditis elegans Serpentine r... 27 7.7
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 58.4 bits (135), Expect = 4e-09
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Frame = +3
Query: 72 GGSLIHPSAVLSAAHYVA---KVPKLRVRAGEWDTQST---KEIYPYQDREVESVAIHKD 233
G S++ + +++AAH +V V G+WD T ++I+ Q + ++KD
Sbjct: 55 GASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQ--RIHFYPLYKD 112
Query: 234 FDSVTMFYDISILFLKSP-MEMTPNVGVVCLPLKDEPAMPGTRCIAMGWGKDKFGKEGRH 410
S +DI+IL + P +E +CLP KD PG +C+ GWG R+
Sbjct: 113 IFS----HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWGSMGL----RY 164
Query: 411 QTILKKVEVPVVNRNTCMNKLQTTILGSLFYLHESFMCAG 530
L+ +P++NR C+N Q I S + S CAG
Sbjct: 165 AERLQAALIPIINRFDCVNSSQ--IYSS---MSRSAFCAG 199
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 50.8 bits (116), Expect = 7e-07
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Frame = +3
Query: 72 GGSLIHPSAVLSAAHYVAK---VPKLRVRAGEWDTQSTKEIYPYQDREVESVAIHKDFD- 239
GGSLI P+ VL+AAH AK VR G + S P++ V +V+IH ++
Sbjct: 85 GGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGGHRSGSGS---PHR---VTAVSIHPWYNI 138
Query: 240 SVTMFYDISILFLKSPMEMTPNVGVVCLPLKDEPAMPGTRCIAMGWGKDKFGKEGRHQTI 419
YD +I+ + P+ + +CLP PA+ C+ GWG G T
Sbjct: 139 GFPSSYDFAIMRIHPPVNTSTTARPICLP--SLPAVENRLCVVTGWGSTIEGSSLSAPT- 195
Query: 420 LKKVEVPVVNRNTCMNKLQTTILGSLFYLHESFMCAG 530
L+++ VP+++ C + +G + S +CAG
Sbjct: 196 LREIHVPLLSTLFCSS--LPNYIGRIHL--PSMLCAG 228
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 31.5 bits (68), Expect = 0.47
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 475 RQRYWEACSTCTSPSCALEVTRQGHLQGRRRFSLGLSYGVR 597
RQR WE+ + P+CA E ++ LQ R R+ L ++
Sbjct: 35 RQRLWESIAKNIDPNCAAEFAKKRWLQLRDRYRKELKIAIK 75
>AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical
protein W03G9.7 protein.
Length = 548
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +3
Query: 153 GEWDTQSTKEIYPYQDREVESVAIHKDFDSVTMFYDISILFLKSPMEMTPNVGVV 317
G+WD + KE Y+D V + K+ + + YD ++ + + T N+ +
Sbjct: 151 GQWDDRYLKEKAEYEDAMVRQETVQKELNIARVNYDNAVKIQEIYKQQTDNLNAL 205
>AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical
protein C18B12.5 protein.
Length = 277
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Frame = -2
Query: 137 LRDFCNVMRRAKNSAGM----YQGSTTDVYFNF 51
+ DFCN+++ +KN G+ +QG+ DV+ F
Sbjct: 73 INDFCNMVKSSKNCLGIIDLDFQGANPDVHDKF 105
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 252 FYDISILFLKSPMEMTPNVGVVCLPLKDE-PAMPGTRCIAMGWGKD 386
F DI++ L+ P+E + ++ CLP + P + T G+G+D
Sbjct: 120 FNDIAVFELEEPIEFSKDIFPACLPSAPKIPRIRETGYKLFGYGRD 165
>AF003130-3|AAB54123.1| 849|Caenorhabditis elegans Hypothetical
protein F55A12.5 protein.
Length = 849
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +3
Query: 165 TQSTKEIYPYQDREVESVAIHKDFDSVTMFYDISILFLKSPMEMTPNVGVVCLPLKDEPA 344
T S KE + D + E + ++ SIL K+P ++ P V P+KD
Sbjct: 578 TPSKKESFDSSDEDEEDDEMEAALLKSAQRHEKSILAQKTPEKLAPKVAT---PMKDAQT 634
Query: 345 MPGTRCIAMGWGKDKFGKEGRHQTI-LKKVEVPVVN 449
++ G K + KKVE+PV++
Sbjct: 635 ETDDAVLSSGESSVVTVKYTPKMDVQKKKVEIPVIS 670
>AC006769-16|AAF60588.2| 338|Caenorhabditis elegans Serpentine
receptor, class j protein20 protein.
Length = 338
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 406 RPSFPNLSFPQPMAMQRVPGIAGSSFRGRQTTPTFGVISIG-LFRNRMLMS*NIV 245
R +F L P A+ P A +FR + T+G++++ +FR L S NI+
Sbjct: 69 RYAFVTLVVDGPFALSSEPAEAFIAFRASFLSGTYGILNVHFIFRYLALKSNNII 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,623,189
Number of Sequences: 27780
Number of extensions: 402408
Number of successful extensions: 1093
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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