Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F21
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   0.87 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   1.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   1.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   1.5  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   1.5  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   2.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.1  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 221 APSFDKNTAVAAPMPELAPVTITTFPAKFIIFINLQSIIG--LHW 93
           APS        AP+P ++P  +T  P +  +F N+   IG  ++W
Sbjct: 397 APSPYGGQMFEAPIPNVSPHYVTPTPPEAPLFQNVLPPIGGMMNW 441


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -2

Query: 207 QKYSSSSSNAGTCTGYNNNFSSEIHYFYKSPVNNRI 100
           Q Y+S+  + G   GY N +  ++H  +  P++++I
Sbjct: 68  QNYNSNVLSNGY--GYGNYYHPQLHSHHGPPIHHQI 101


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -2

Query: 207 QKYSSSSSNAGTCTGYNNNFSSEIHYFYKSPVNNRI 100
           Q Y+S+  + G   GY N +  ++H  +  P++++I
Sbjct: 68  QNYNSNVLSNGY--GYGNYYHPQLHSHHGPPIHHQI 101


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -2

Query: 207 QKYSSSSSNAGTCTGYNNNFSSEIHYFYKSPVNNRI 100
           Q Y+S+  + G   GY N +  ++H  +  P++++I
Sbjct: 68  QNYNSNVLSNGY--GYGNYYHPQLHSHHGPPIHHQI 101


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = -2

Query: 207 QKYSSSSSNAGTCTGYNNNFSSEIHYFYKSPVNNRI 100
           Q Y+S+  + G   GY N +  ++H  +  P++++I
Sbjct: 68  QNYNSNVLSNGY--GYGNYYHPQLHSHHGPPIHHQI 101


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 396 IIHQNVQLSVVVHSVFDY 343
           ++HQ VQ SV+   V DY
Sbjct: 347 LLHQKVQFSVLGFFVVDY 364


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +1

Query: 271 KDCEKSTATFSITADLTKENDIEKIIKNTVDHYGQL 378
           K C        I  D+  +N +++  K++  HY  L
Sbjct: 106 KTCPGDLYDSDIIQDIVPQNVLDEEEKSSTKHYAAL 141


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = -2

Query: 159 NNNFSSEIHYFYKSPVNNRITLAPGESKTHSIILSI 52
           +NN S+        P N    L P    T  I+L I
Sbjct: 379 DNNVSAVTTQHQGYPTNTVTILGPNSGNTPKILLQI 414


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 5/17 (29%), Positives = 9/17 (52%)
 Frame = +3

Query: 189 CYCCIFVKTRCKTLTYW 239
           CY C+ +  +   + YW
Sbjct: 46  CYACLLMVVKILWVIYW 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,008
Number of Sequences: 336
Number of extensions: 2327
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)