Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F21
(499 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 47 2e-06
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 47 2e-06
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 46 3e-06
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 43 2e-05
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 42 7e-05
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 38 6e-04
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 34 0.010
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 32 0.055
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 31 0.073
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 28 0.68
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 2.1
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 26 2.7
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 26 2.7
SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha su... 26 2.7
SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces p... 26 2.7
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 25 4.8
SPAC9.08c |||steroid reductase |Schizosaccharomyces pombe|chr 1|... 25 4.8
SPCC576.09 |rps20||40S ribosomal protein S20|Schizosaccharomyces... 25 6.3
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 25 6.3
SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 25 8.4
SPAC4F10.20 |grx1||glutaredoxin Grx1|Schizosaccharomyces pombe|c... 25 8.4
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 46.8 bits (106), Expect = 2e-06
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +1
Query: 313 DLTKENDIEKIIKNTVDHYGQLDVLVNNAGIIETGTIENTSLAQFDRLMNTNV 471
D+ + I+K ++ + H+G++DVL+NNAG +E+T+ Q + NTNV
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNV 74
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 46.8 bits (106), Expect = 2e-06
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +1
Query: 313 DLTKENDIEKIIKNTVDHYGQLDVLVNNAGIIETGTIENTSLAQFDRLMNTNV 471
D+ + I+K ++ + H+G++DVL+NNAG +E+T+ Q + NTNV
Sbjct: 22 DVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNV 74
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 46.0 bits (104), Expect = 3e-06
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Frame = +1
Query: 115 WRFIKIMNFAGKVVXXXXXXXXXXXXXXXFLSKLGAKLSLTGRNLENLQKVSK---DCEK 285
W F I + GKV L++ GAK+ L GRN E QKV K D +
Sbjct: 32 WTFNDIPDLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVR 91
Query: 286 STATFSITADLTKENDIEKIIKNTVDHYGQLDVLVNNAGIIETGTIENTSLAQFDRLMNT 465
+ + DL + + ++ + +L +LVNNAGI+ E T ++ + T
Sbjct: 92 HSKIRFLRLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNP-PFELTK-DGYELQIQT 149
Query: 466 NVRSXYYLTML 498
N S Y T L
Sbjct: 150 NYLSHYLFTEL 160
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 43.2 bits (97), Expect = 2e-05
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +1
Query: 292 ATFSITADLTKENDIEKIIKNTVDHYGQLDVLVNNAGIIETGTIENTSLAQFDRLMNTNV 471
A ++ AD++K + IE I+ + G +DVL+NNAG+ + E S +D ++ +
Sbjct: 46 AALALQADVSKADQIETAIEKVIQTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVL 105
Query: 472 RSXY 483
R Y
Sbjct: 106 RGNY 109
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 41.5 bits (93), Expect = 7e-05
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 313 DLTKENDIEKIIKNTVDHYGQLDVLVNNAGIIETGTIENTSLAQFDRLMNTNVRSXYYLT 492
D+T +E K+ +G +D+++NNAG G E+ ++ + R MN N Y+T
Sbjct: 55 DVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYIT 114
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 38.3 bits (85), Expect = 6e-04
Identities = 24/120 (20%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = +1
Query: 145 GKVVXXXXXXXXXXXXXXXFLSKLG-AKLSLTGRNLENLQKVSKDCEKS--TATFSITAD 315
GK + ++K+ KL L R +++++K+ E + + D
Sbjct: 6 GKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLD 65
Query: 316 LTKENDIEKIIKNTVDHYGQLDVLVNNAGI-IETGTIENTSLAQFDRLMNTNVRSXYYLT 492
++ I +I++ + +DVL+NNAG+ + T + + ++ ++ TNV +T
Sbjct: 66 VSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMT 125
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 34.3 bits (75), Expect = 0.010
Identities = 18/93 (19%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +1
Query: 208 SKLGAKLSLTGRNLENLQKVSKDCEKS-TATFSITADLTKENDIEKIIKNTVDHYGQLDV 384
++ G + +T + +K K E++ ++ D+++ + +E ++ + ++ V
Sbjct: 42 AQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTLKIDISRSDTVEAGVEEIQKIFKEIHV 101
Query: 385 LVNNAGIIETGTIENTSLAQFDRLMNTNVRSXY 483
+V NAG+ ++ ++ +F+++MN N S Y
Sbjct: 102 VVANAGMPFRRSVLDSPPHEFEKVMNINTNSVY 134
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 31.9 bits (69), Expect = 0.055
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 456 QTIKLSQRRILNSSGLNNSCII-HQNVQLSVVVHSVFDYFFDVILFRQISSD*KCSSRFF 280
Q LS+RR+LN+S C++ H V L H + ++F + F C + F
Sbjct: 81 QKQNLSERRMLNASCFLGFCVLAHDYVNLINARHFMIEHFLSLFAF--------CRTILF 132
Query: 279 AVLTYFLQV 253
++LT FL V
Sbjct: 133 SLLTSFLLV 141
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 31.5 bits (68), Expect = 0.073
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 316 LTKENDIEKIIKNTVDHYGQLDVLVNNAGIIETG-TIENTSLAQFDRLMNTNVRSXYYLT 492
L K ++ ++ + G +DVLVNN + +IE+ Q+D TN+ S +++T
Sbjct: 102 LDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVT 161
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 28.3 bits (60), Expect = 0.68
Identities = 18/97 (18%), Positives = 47/97 (48%)
Frame = +1
Query: 208 SKLGAKLSLTGRNLENLQKVSKDCEKSTATFSITADLTKENDIEKIIKNTVDHYGQLDVL 387
S+ G + + GRN +L++ + + ++D++ + ++ ++D +
Sbjct: 22 SQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADVQSDMKNL--KSIFESVEIDTV 79
Query: 388 VNNAGIIETGTIENTSLAQFDRLMNTNVRSXYYLTML 498
V+ AG++++ TS + D ++ TN+ S L+ +
Sbjct: 80 VHAAGVLQSSLCVRTSEKEIDSIICTNLVSAIKLSKM 116
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 2.1
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 208 SKLGAKLSLTGRNLENLQKVSKDCEKSTATFSITADLTKENDIEKIIK 351
++L S RNLEN K+ +T T S NDI I++
Sbjct: 1670 TELNEDTSAVSRNLENATNDLKETFPTTTTISTARAKPGNNDINTILR 1717
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 26.2 bits (55), Expect = 2.7
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 370 GQLDVLVNNAGI-IETGTIENTSLAQFDRLMNTNVRSXYY 486
G+LDV++ NAGI I ++E+ + + +++ N+ YY
Sbjct: 87 GRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYY 126
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 26.2 bits (55), Expect = 2.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 192 SSSNAGTCTGYNNNFSSEIHYFYKSPVN 109
S+++A T +G N++ S + YF +PVN
Sbjct: 542 SAASARTSSGRNSSESDRVSYFGLAPVN 569
>SPAC458.07 |tfa1|SPAPYUG7.01|transcription factor TFIIE alpha
subunit Tfa1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 448
Score = 26.2 bits (55), Expect = 2.7
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 226 LSLTGRNL--ENLQKVSKDCEKSTATFSITADLTKENDIEK 342
+SL +NL +NL K + D ST++ SIT D + + + ++
Sbjct: 222 VSLDTQNLSQQNLSKSNSDVRLSTSSPSITVDFSADKETDE 262
>SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 2.7
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 170 QVPALELLLLYFCQNS-VQNSHLLGEISR 253
Q+P LE LL FC NS V+ ++L +S+
Sbjct: 179 QLPTLENLLNIFCSNSLVEKAYLFDVLSK 207
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 25.4 bits (53), Expect = 4.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 186 SNAGTCTGYNNNFSSEIHYFYKS 118
SNAG+ + NN + I Y+++S
Sbjct: 130 SNAGSSNDFENNVAKAIAYYWRS 152
>SPAC9.08c |||steroid reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 25.4 bits (53), Expect = 4.8
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -3
Query: 203 NTAVAAPM---PELAPVTITTFPAKFII-FINLQSIIGLHWLPARVRHTQLS 60
N A+ +P+ P+++P+ T F + + F+N SI GL+ + A V+H +S
Sbjct: 103 NRALVSPLLMAPQVSPMHWTVFVSAVLFNFLNGMSI-GLYLVQASVQHHPVS 153
>SPCC576.09 |rps20||40S ribosomal protein S20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 118
Score = 25.0 bits (52), Expect = 6.3
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 223 KLSLTGRNLENLQKVSKD 276
+++LT RN+ NL+KV D
Sbjct: 21 RITLTSRNVRNLEKVCSD 38
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 25.0 bits (52), Expect = 6.3
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 9/44 (20%)
Frame = -2
Query: 411 LNNSCIIHQNVQL--------SVVVHSVFDYF-FDVILFRQISS 307
+ N+ +HQN+ + S +VHS+FDY+ + I F+ I S
Sbjct: 365 VRNAVFLHQNIYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVS 408
>SPAC20H4.06c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 8.4
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = -3
Query: 251 SRFLPVSESFAPSFDKNTAVAAPMPELAPVTITTFPAKFIIFINLQSIIGLHWLP 87
S F PV +F D++ + + + P F++ NLQS +W P
Sbjct: 239 SPFTPVKHTFLSKKDRSKGKSIIKSQNCSDGLPPLPG-FVVVFNLQSPFQNNWFP 292
>SPAC4F10.20 |grx1||glutaredoxin Grx1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 24.6 bits (51), Expect = 8.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 326 SFVKSAVIENVAVDFSQSLLTFC 258
SFV SAV +N V F++S +C
Sbjct: 6 SFVDSAVADNDVVVFAKSYCPYC 28
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,904,377
Number of Sequences: 5004
Number of extensions: 38609
Number of successful extensions: 125
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 196153982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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