Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F20
(572 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35638| Best HMM Match : Upf2 (HMM E-Value=2.1e-17) 31 0.88
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 31 0.88
SB_56457| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_5811| Best HMM Match : IKI3 (HMM E-Value=0.0021) 29 2.7
SB_11111| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_42156| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_44777| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_25423| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_18971| Best HMM Match : PWP2 (HMM E-Value=4) 28 6.2
SB_12786| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_15918| Best HMM Match : Toxin_23 (HMM E-Value=2.3) 27 8.2
SB_2744| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_49271| Best HMM Match : DUF916 (HMM E-Value=4.4) 27 8.2
>SB_35638| Best HMM Match : Upf2 (HMM E-Value=2.1e-17)
Length = 1420
Score = 30.7 bits (66), Expect = 0.88
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 238 QSNEQSYKDLVMPLITQLVDNLKSKQITD 324
+ N+Q Y+DL +P+ + L N++ KQ+ +
Sbjct: 293 KGNKQQYRDLEIPISSDLAANMREKQVAE 321
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 125 GSTAGSSPVRASAAYPLARSQAWCKSLAASVPDTAWM 15
GS S + S PLA + +CK A VP+T W+
Sbjct: 449 GSGKTSLLLTISGELPLASGELYCKGRVAYVPETPWL 485
>SB_56457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 2/109 (1%)
Frame = +1
Query: 187 LKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKYPY 366
++V D+V FET +NE + + P V L K D K GHT
Sbjct: 1 MEVEKSPTDVVQEFETLAANEVKKERRIAPGEAHFVWKLIQKHGEDYKAERLGHTCVLMS 60
Query: 367 PILYD-TDLKLKSSKLHFDDXERYERMP-FVKTGCDTFDKYEKNVIDFM 507
Y + L S + D Y+ P +K C+ F + ++ +++
Sbjct: 61 FAGYTFSHAPLYSKAMSKDKENYYQHTPKQLKRKCEAFLRSSQDFSEYL 109
>SB_55816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 376 YDTDLKLKSSKLHFDDXERYERMPFVKTGCDTFDKYEKNVID 501
YD + K K+H+DD E Y + D +D Y+ N D
Sbjct: 636 YDDNEGSKMVKVHWDDYENYVNVNVNDDDYDDYDDYDDNDYD 677
>SB_5811| Best HMM Match : IKI3 (HMM E-Value=0.0021)
Length = 567
Score = 29.1 bits (62), Expect = 2.7
Identities = 24/69 (34%), Positives = 29/69 (42%)
Frame = -3
Query: 234 SFEGDDNICLLVWHFELINVSDGVRLVRVGAAHASVRQHSRQQSREGQRRVSSRQVTGLV 55
SF DD+ C + W DG V A+ + R SREG SS +V GL
Sbjct: 190 SFPWDDHHCRISWR------GDGQYFVVSAIEPATDARKLRVWSREGVLMTSSEEVDGLE 243
Query: 54 QVLSGVCSG 28
Q L SG
Sbjct: 244 QSLCWKPSG 252
>SB_11111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1252
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 277 LITQLVDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDD 423
+++ LV +++ KQ+ D + AG Y Y +L T L L + K+H +D
Sbjct: 221 ILSVLVKDVQEKQLFDKERMRAG----YEYEVLGGTHLMLATQKMHAED 265
>SB_42156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 542 ILDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
ILDK LNV++ + Y NV+ P L KG
Sbjct: 431 ILDKGKYALNVTVPKLDKGKYALNVTVPTLDKG 463
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 539 LDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
LDK LNV++ ++ Y NV+ P L KG
Sbjct: 233 LDKGKYALNVTVSTLDKGKYALNVTVPTLDKG 264
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 539 LDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
LDK LNV++ ++ Y NV+ P L KG
Sbjct: 318 LDKGKYALNVTVPTLNKGKYALNVTVPTLDKG 349
>SB_44777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 560 DFSLETILDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
D +L T LDK LNV++ ++ Y NV+ P L KG
Sbjct: 471 DVTLPT-LDKGKYALNVTVPTLDKGKYALNVTVPTLDKG 508
>SB_25423| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 SKQITDIKI-YLAGHTSKYPYPILYDTDLKLKSSKLHFDDXERYERMPFV 453
S+QIT + LA +SK+P+P+L D L++ S D + P++
Sbjct: 2 SEQITCFLLPVLATPSSKFPFPVLVDAVLRMLKSMSSTSDGAIHGASPWL 51
>SB_18971| Best HMM Match : PWP2 (HMM E-Value=4)
Length = 400
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +1
Query: 82 YAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNKQADIVVSFETTQSNEQSYK 261
Y AL +T D C+ + D AIGD ++VP K+ DI S N +
Sbjct: 20 YKALTVTHKQSFKYNDTCLNYSSKDVVMAIGDA--IEVPLKEEDISTSHPLPSYNPNAPP 77
Query: 262 DLVMPLI 282
+++ +
Sbjct: 78 KIIVKFV 84
>SB_12786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 539 LDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
LDK LNV++ ++ Y NV+ P L KG
Sbjct: 62 LDKGKYALNVTVPTLDNVKYALNVTVPTLDKG 93
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -1
Query: 560 DFSLETILDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
D ++ T LDK LNV++ ++ Y NV+ P L KG
Sbjct: 14 DMTVPT-LDKGKYALNVTVPTLDKGKYALNVTVPTLDKG 51
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 539 LDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
LDK LNV++ ++ Y NV+ P L KG
Sbjct: 104 LDKGKYALNVTVPTLDKGKYALNVTGPTLDKG 135
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 539 LDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
LDK LNV++ ++ Y NV+ P L KG
Sbjct: 202 LDKGKYALNVTVPTLDKSKYALNVTLPTLDKG 233
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 539 LDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
LDK LNV+I ++ Y NV+ P L KG
Sbjct: 307 LDKGKYALNVTIPTLDKGKYALNVTIPTLDKG 338
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -1
Query: 560 DFSLETILDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
D ++ T LDK LNV++ ++ Y NV+ P L KG
Sbjct: 343 DMTVPT-LDKGKYALNVTVPTLDKGKYALNVTVPTLDKG 380
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 27.5 bits (58), Expect = 8.2
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Frame = +2
Query: 359 IPTLSYTILI*N*RAPNYISTTKSATSVCLLSKLD---------VIHSTNMKRTLST 502
IP++S +IL N +TT+ ATSV LLS L+ V+ T MKRT T
Sbjct: 756 IPSISTSILPYNTTVIATPNTTRIATSVILLSSLNDTIRTRSTSVVFETTMKRTQIT 812
>SB_15918| Best HMM Match : Toxin_23 (HMM E-Value=2.3)
Length = 227
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 349 TSKYPYPILYDTDLKLKSSKLH 414
T YP+P LYDT L L++ H
Sbjct: 203 TEIYPHPSLYDTQLNLQTKISH 224
>SB_2744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 539 LDKPSLILNVSIKSITFFSYLSNVSHPVLTKGI 441
LDK LNV++ ++ Y NV+ P L KG+
Sbjct: 88 LDKGKYALNVTVPTLDKGKYALNVTVPTLDKGM 120
>SB_49271| Best HMM Match : DUF916 (HMM E-Value=4.4)
Length = 491
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 560 DFSLETILDKPSLILNVSIKSITFFSYLSNVSHPVLTKG 444
D + LDK LNV++ ++ Y NV+ P L KG
Sbjct: 270 DVATVPTLDKGKYALNVTVPTLDKGKYALNVTVPTLDKG 308
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,034,459
Number of Sequences: 59808
Number of extensions: 315283
Number of successful extensions: 924
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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