Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F20
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92826-8|CAI79117.1| 325|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z81475-12|CAI79149.1| 325|Caenorhabditis elegans Hypothetical p... 30 1.0
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.3
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 2.3
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.3
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.3
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 2.3
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.3
Z81473-6|CAB03895.2| 657|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81456-1|CAB03810.1| 548|Caenorhabditis elegans Hypothetical pr... 28 5.4
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 28 5.4
Z79752-2|CAB02079.1| 172|Caenorhabditis elegans Hypothetical pr... 27 9.5
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 27 9.5
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 27 9.5
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 27 9.5
>Z92826-8|CAI79117.1| 325|Caenorhabditis elegans Hypothetical
protein C18D11.7 protein.
Length = 325
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +1
Query: 316 ITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDXERYERMPFVKTGCDTFDKYEKNV 495
I D K ++A + P I Y + +K+ HF ER E PF + DT+D +
Sbjct: 39 IKDRKFHIAAFFKETP-EIEYQSSVKIWFKDEHFSYYERSEPFPFEEKCEDTYDIEYLDW 97
Query: 496 IDFMDTFKI 522
TFK+
Sbjct: 98 TSIEVTFKV 106
>Z81475-12|CAI79149.1| 325|Caenorhabditis elegans Hypothetical
protein C18D11.7 protein.
Length = 325
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/69 (30%), Positives = 31/69 (44%)
Frame = +1
Query: 316 ITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDXERYERMPFVKTGCDTFDKYEKNV 495
I D K ++A + P I Y + +K+ HF ER E PF + DT+D +
Sbjct: 39 IKDRKFHIAAFFKETP-EIEYQSSVKIWFKDEHFSYYERSEPFPFEEKCEDTYDIEYLDW 97
Query: 496 IDFMDTFKI 522
TFK+
Sbjct: 98 TSIEVTFKV 106
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 181 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKY 360
Y L++PN Q + ++ SN+ D L +L D+ K K +I L T K
Sbjct: 4354 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 4413
Query: 361 PYPILYDTDLK 393
++ +K
Sbjct: 4414 GETATFNVKVK 4424
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 181 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKY 360
Y L++PN Q + ++ SN+ D L +L D+ K K +I L T K
Sbjct: 3714 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 3773
Query: 361 PYPILYDTDLK 393
++ +K
Sbjct: 3774 GETATFNVKVK 3784
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 181 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKY 360
Y L++PN Q + ++ SN+ D L +L D+ K K +I L T K
Sbjct: 4354 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 4413
Query: 361 PYPILYDTDLK 393
++ +K
Sbjct: 4414 GETATFNVKVK 4424
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 181 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKY 360
Y L++PN Q + ++ SN+ D L +L D+ K K +I L T K
Sbjct: 4354 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 4413
Query: 361 PYPILYDTDLK 393
++ +K
Sbjct: 4414 GETATFNVKVK 4424
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 181 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKY 360
Y L++PN Q + ++ SN+ D L +L D+ K K +I L T K
Sbjct: 3714 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 3773
Query: 361 PYPILYDTDLK 393
++ +K
Sbjct: 3774 GETATFNVKVK 3784
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 181 YQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKY 360
Y L++PN Q + ++ SN+ D L +L D+ K K +I L T K
Sbjct: 4354 YSLEIPNAQVEDAADYKVVVSNDAGDADSSAALTVKLADDGKDKVKPEIVSGLIPTTVKQ 4413
Query: 361 PYPILYDTDLK 393
++ +K
Sbjct: 4414 GETATFNVKVK 4424
>Z81473-6|CAB03895.2| 657|Caenorhabditis elegans Hypothetical
protein C17D12.7 protein.
Length = 657
Score = 28.7 bits (61), Expect = 3.1
Identities = 30/113 (26%), Positives = 44/113 (38%)
Frame = +1
Query: 223 SFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKS 402
+F + ++ S + +P+ Q +D QI+ K K P PI D KL
Sbjct: 27 TFMESNCSQMSVRQEFLPIFPQRLDLC---QISPKKSEKKSKKKKIPSPIKKTNDTKL-- 81
Query: 403 SKLHFDDXERYERMPFVKTGCDTFDKYEKNVIDFMDTFKIKLGLSNMVSSEKS 561
S L R E+ D D EKN + ++ F LSN + E S
Sbjct: 82 SILSEKSEIRSEKHKNKCKSAD-LDAMEKNFKELLENFSKNAALSNSLRDEAS 133
>Z81456-1|CAB03810.1| 548|Caenorhabditis elegans Hypothetical
protein B0462.1 protein.
Length = 548
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +1
Query: 241 SNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFD 420
SN+Q + L + L +++ + D K + S Y Y I D++ + L
Sbjct: 354 SNQQKAEILKERMEEFLTNDVFYIVVFDCKSFFTKLFSPYAYVISCDSN---SGNVLKSI 410
Query: 421 DXERYERMPFVKTGCDTFDKYEKNVIDFMDTFK 519
D + G +T++ Y +IDFM TF+
Sbjct: 411 DRGECHVWIYRSVGLNTYENYTTRMIDFMRTFE 443
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 292 VDNLKSKQITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDXERYERMPFVKTGCDT 471
V+NL S ++ K YL + P L D DL+ ++L D + E++ F++ DT
Sbjct: 6 VENLFSLCDSESKGYLTMEDLRKVCPQLDDNDLRFIFTELDQDGSGKIEKLEFLRGFQDT 65
Query: 472 FDKYEKNVIDFM 507
E + ++ M
Sbjct: 66 VQHGESHGLNGM 77
>Z79752-2|CAB02079.1| 172|Caenorhabditis elegans Hypothetical
protein D2005.2 protein.
Length = 172
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +1
Query: 313 QITDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDXERYERMPFVKTGCDTFDKYE 486
Q+ ++ L G T+ YPY I + S +L +R++ G FD+Y+
Sbjct: 12 QLLFLQCLLIGFTAAYPYLIFPASPSSGDSRRLVKRAFDRFDNSGVFSFGAKRFDRYD 69
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +1
Query: 76 RGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVP-NKQADIVVSFETTQSNEQ 252
R Y T +P++ P V D + DV+ K N+ + F T + E
Sbjct: 464 RNYEEKTETTTVPSLAPATNVTYKDLSNAQCVDDVFNKKTEMNESLPVGSVFNTHNNTEG 523
Query: 253 SYKD 264
Y+D
Sbjct: 524 GYRD 527
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +1
Query: 76 RGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVP-NKQADIVVSFETTQSNEQ 252
R Y T +P++ P V D + DV+ K N+ + F T + E
Sbjct: 798 RNYEEKTETTTVPSLAPATNVTYKDLSNAQCVDDVFNKKTEMNESLPVGSVFNTHNNTEG 857
Query: 253 SYKD 264
Y+D
Sbjct: 858 GYRD 861
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = +1
Query: 76 RGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVP-NKQADIVVSFETTQSNEQ 252
R Y T +P++ P V D + DV+ K N+ + F T + E
Sbjct: 1048 RNYEEKTETTTVPSLAPATNVTYKDLSNAQCVDDVFNKKTEMNESLPVGSVFNTHNNTEG 1107
Query: 253 SYKD 264
Y+D
Sbjct: 1108 GYRD 1111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,316,183
Number of Sequences: 27780
Number of extensions: 229128
Number of successful extensions: 620
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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