Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F16
(638 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 44 9e-05
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 44 9e-05
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 44 9e-05
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 44 9e-05
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 44 9e-05
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 44 9e-05
AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine re... 31 0.53
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 31 0.92
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 31 0.92
U21308-9|AAW57822.1| 787|Caenorhabditis elegans Nfi (nuclear fa... 30 1.2
U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear fa... 30 1.2
U21308-7|AAW57823.1| 823|Caenorhabditis elegans Nfi (nuclear fa... 30 1.2
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 30 1.2
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 30 1.2
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 30 1.6
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 30 1.6
AF000299-3|AAW88403.1| 342|Caenorhabditis elegans Serpentine re... 27 8.6
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Frame = +2
Query: 176 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 349
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 350 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTP 529
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 530 SDLDGVL 550
++ L
Sbjct: 148 DSINSDL 154
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 555 VLINALYFKGNWRVKF 602
VL NALYFK +W+ KF
Sbjct: 157 VLTNALYFKADWQNKF 172
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Frame = +2
Query: 176 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 349
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 350 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTP 529
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 530 SDLDGVL 550
++ L
Sbjct: 148 DSINSDL 154
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 555 VLINALYFKGNWRVKF 602
VL NALYFK +W+ KF
Sbjct: 157 VLTNALYFKADWQNKF 172
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Frame = +2
Query: 176 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 349
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 350 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTP 529
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 530 SDLDGVL 550
++ L
Sbjct: 148 DSINSDL 154
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 555 VLINALYFKGNWRVKF 602
VL NALYFK +W+ KF
Sbjct: 157 VLTNALYFKADWQNKF 172
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Frame = +2
Query: 176 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 349
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 350 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTP 529
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 530 SDLDGVL 550
++ L
Sbjct: 148 DSINSDL 154
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 555 VLINALYFKGNWRVKF 602
VL NALYFK +W+ KF
Sbjct: 157 VLTNALYFKADWQNKF 172
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Frame = +2
Query: 176 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 349
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 350 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTP 529
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 530 SDLDGVL 550
++ L
Sbjct: 148 DSINSDL 154
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 555 VLINALYFKGNWRVKF 602
VL NALYFK +W+ KF
Sbjct: 157 VLTNALYFKADWQNKF 172
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Frame = +2
Query: 176 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 349
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 350 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTP 529
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 530 SDLDGVL 550
++ L
Sbjct: 148 DSINSDL 154
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 555 VLINALYFKGNWRVKF 602
VL NALYFK +W+ KF
Sbjct: 157 VLTNALYFKADWQNKF 172
>AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein266 protein.
Length = 327
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -3
Query: 342 FKTPPSFSPISFKILKYFLLKHECGWSLNTTLISFRVSSVAPNDSADIIVHADSP-DVTK 166
F+TP + + + ++ + C W L I + + I+ + D P D+
Sbjct: 31 FQTPKTMGSVKYVMMNFHAWCILCDWMLAVMTIPYLLFPAMVGFPLGILKYFDVPIDIQV 90
Query: 165 WLSVFRLTRVTSSSVKLYNDLFKNV*AQKS 76
+L +T V SS V ++ + + + AQK+
Sbjct: 91 YLVAVGITAVYSSIVLIFENRYYMMFAQKT 120
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 30.7 bits (66), Expect = 0.92
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 555 VLINALYFKGNWRVKFPYE 611
VL NA YFK NW+ KF E
Sbjct: 166 VLTNAFYFKANWQTKFKKE 184
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 30.7 bits (66), Expect = 0.92
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 555 VLINALYFKGNWRVKFPYE 611
VL NA YFK NW+ KF E
Sbjct: 166 VLTNAFYFKANWQTKFKKE 184
>U21308-9|AAW57822.1| 787|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform b protein.
Length = 787
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 116 NFTDELVTRVNRKTESHFVTSGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRK 292
N D V V+ + H + A I++ALS T ++ E V R+HPH+ + +
Sbjct: 446 NHGDVGVVVVDERNREHVI----HAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFE 501
Query: 293 YFNILKEIGENDGGV 337
+ N +E+ +N+G +
Sbjct: 502 FLNCNQEMNKNEGAL 516
>U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform a protein.
Length = 807
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 116 NFTDELVTRVNRKTESHFVTSGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRK 292
N D V V+ + H + A I++ALS T ++ E V R+HPH+ + +
Sbjct: 466 NHGDVGVVVVDERNREHVI----HAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFE 521
Query: 293 YFNILKEIGENDGGV 337
+ N +E+ +N+G +
Sbjct: 522 FLNCNQEMNKNEGAL 536
>U21308-7|AAW57823.1| 823|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform c protein.
Length = 823
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 116 NFTDELVTRVNRKTESHFVTSGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRK 292
N D V V+ + H + A I++ALS T ++ E V R+HPH+ + +
Sbjct: 482 NHGDVGVVVVDERNREHVI----HAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFE 537
Query: 293 YFNILKEIGENDGGV 337
+ N +E+ +N+G +
Sbjct: 538 FLNCNQEMNKNEGAL 552
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 558 LINALYFKGNWRVKFPYEKYAIQAHFT 638
L+NA+YFK +W+ KF E + FT
Sbjct: 153 LVNAMYFKADWQSKFAKESTTGREFFT 179
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 558 LINALYFKGNWRVKFPYEKYAIQAHFT 638
L+NA+YFK +W+ KF E + FT
Sbjct: 153 LVNAMYFKADWQSKFAKESTTGREFFT 179
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +3
Query: 555 VLINALYFKGNWRVKF 602
+LINA++F+G+WR KF
Sbjct: 162 ILINAIFFQGDWRRKF 177
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = +3
Query: 555 VLINALYFKGNWRVKF 602
+LINA++F+G+WR KF
Sbjct: 162 ILINAIFFQGDWRRKF 177
>AF000299-3|AAW88403.1| 342|Caenorhabditis elegans Serpentine
receptor, class z protein24, isoform a protein.
Length = 342
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/49 (20%), Positives = 29/49 (59%)
Frame = -2
Query: 586 FPLKYKALIKTKEYPIQITWCYYLIYSFVSCQSNEIIYSSRGSRVIVPR 440
+P ++++K ++Y ++ W +YL++ + + I+Y + S++I +
Sbjct: 147 YPSHIESVLKVQKYILKFIWIFYLLF-VIKESTGIILYVLKFSKMITTK 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,660,118
Number of Sequences: 27780
Number of extensions: 270055
Number of successful extensions: 682
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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