Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F15
         (613 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X07732-1|CAA30558.1|  417|Homo sapiens hepsin protein.                 31   3.2  
X07002-1|CAA30058.1|  304|Homo sapiens hepsin protein.                 31   3.2  
M18930-1|AAA36013.1|  417|Homo sapiens protein ( Human hepsin mR...    31   3.2  
BC025716-1|AAH25716.1|  417|Homo sapiens hepsin (transmembrane p...    31   3.2  

>X07732-1|CAA30558.1|  417|Homo sapiens hepsin protein.
          Length = 417

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 542 CGVEDTVVNKIVGGNDTKIHQYPW 613
           CG     V++IVGG DT + ++PW
Sbjct: 153 CGRRKLPVDRIVGGRDTSLGRWPW 176


>X07002-1|CAA30058.1|  304|Homo sapiens hepsin protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 542 CGVEDTVVNKIVGGNDTKIHQYPW 613
           CG     V++IVGG DT + ++PW
Sbjct: 40  CGRRKLPVDRIVGGRDTSLGRWPW 63


>M18930-1|AAA36013.1|  417|Homo sapiens protein ( Human hepsin mRNA,
           complete cds. ).
          Length = 417

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 542 CGVEDTVVNKIVGGNDTKIHQYPW 613
           CG     V++IVGG DT + ++PW
Sbjct: 153 CGRRKLPVDRIVGGRDTSLGRWPW 176


>BC025716-1|AAH25716.1|  417|Homo sapiens hepsin (transmembrane
           protease, serine 1) protein.
          Length = 417

 Score = 31.1 bits (67), Expect = 3.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 542 CGVEDTVVNKIVGGNDTKIHQYPW 613
           CG     V++IVGG DT + ++PW
Sbjct: 153 CGRRKLPVDRIVGGRDTSLGRWPW 176


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,021,506
Number of Sequences: 237096
Number of extensions: 1709170
Number of successful extensions: 3424
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3424
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)