Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F14
(529 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3465| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.016
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.083
SB_27122| Best HMM Match : I-set (HMM E-Value=1.9e-39) 34 0.083
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 33 0.11
SB_29237| Best HMM Match : I-set (HMM E-Value=0) 33 0.11
SB_36553| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 31 0.59
SB_28651| Best HMM Match : ig (HMM E-Value=1.4e-09) 31 0.59
SB_19226| Best HMM Match : I-set (HMM E-Value=0) 31 0.78
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_7922| Best HMM Match : SMC_C (HMM E-Value=1.5e-08) 29 2.4
SB_27842| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_1002| Best HMM Match : OTCace_N (HMM E-Value=0) 28 5.5
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 27 7.2
SB_21023| Best HMM Match : I-set (HMM E-Value=2e-07) 27 7.2
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 27 7.2
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 9.6
SB_23072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_10606| Best HMM Match : I-set (HMM E-Value=0) 27 9.6
>SB_3465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 36.3 bits (80), Expect = 0.016
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 87 SGDYTCVVSTFMDEDSKTKQMTV-FVPETKFRLIQNKT-DDDTVNVICAAEGVYPAPNLT 260
+G YTC + M D+ T Q+TV + PE I + D +++ C A GV P P +T
Sbjct: 60 AGTYTCTATNAMGSDTTTVQVTVNYKPEMVSSTINTSSWDRKVLSLQCKARGV-PLPQIT 118
Query: 261 LATP 272
P
Sbjct: 119 WYNP 122
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 33.9 bits (74), Expect = 0.083
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +3
Query: 3 RVDLTYRASSDPLKMHRALRIIKTNTDISGDYTCVVSTFM-DEDSKTK-QMTVFV-PETK 173
RV + R D + L I T D GDYTC+V + +SKTK ++ F PE +
Sbjct: 630 RVKDSRRTKCDLVDGEVKLTIKTTRADDQGDYTCIVRNELGSAESKTKLKVIAFARPEFR 689
Query: 174 FRLIQNK-TDDDTVNVICAAEGVYPAPNL 257
+L K + + V + EG YP P++
Sbjct: 690 TKLKPVKAVEGEEVQLDVKVEG-YPKPDI 717
>SB_27122| Best HMM Match : I-set (HMM E-Value=1.9e-39)
Length = 378
Score = 33.9 bits (74), Expect = 0.083
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 87 SGDYTCVVSTFMDEDSKTKQMTV-FVPETKFRLIQNKT-DDDTVNVICAAEGVYPAPNLT 260
+G YTC + M D+ T Q+TV + PE + D + +++ C GV P+P +T
Sbjct: 263 AGTYTCTATNAMGSDTTTVQVTVNYKPEMVSSTTNTSSWDRNVLSLQCKVRGV-PSPQIT 321
Query: 261 LATP 272
P
Sbjct: 322 WYKP 325
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Frame = +3
Query: 87 SGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVN-------VICAAEGVYP 245
+G Y C + +++TK + +V I +K+ D TVN + C ++G YP
Sbjct: 176 TGQYVCTAVNIVSGNTQTKTASTYVIVKYKPSILSKSPDQTVNETTGSLKLTCISDG-YP 234
Query: 246 APNLT 260
+P +T
Sbjct: 235 SPTVT 239
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 48 HRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKT 197
++ L I +T SG+YTC+ S S KQ+ + VP + F + NKT
Sbjct: 492 NKTLVIFQTEYRDSGNYTCIASNRAGNTSLAKQVDIQVPASVF--VDNKT 539
>SB_29237| Best HMM Match : I-set (HMM E-Value=0)
Length = 869
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 54 ALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNVI--CA 227
ALR KT + SG++TC S + S+T Q+ + P ++ + + V+ CA
Sbjct: 370 ALRNNKTAMEDSGNFTCTASNTAGKKSQTVQIIISQPPVLTEEPKDMQAMEGLKVVLKCA 429
Query: 228 AEGVYPAPNL 257
A+GV P P L
Sbjct: 430 AKGV-PPPKL 438
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +3
Query: 87 SGDYTCVVSTFMD-EDSKTKQMTVFVPETK-FRLIQNKT---DDDTVNVICAAEGVYPAP 251
SG+YTC+ F+ +S +M+V V F++ + T DT+ + C+A G P P
Sbjct: 198 SGNYTCIAQNFLGVRESPAFKMSVIVASVPVFQVRPSDTIAVVGDTITLYCSATGT-PKP 256
Query: 252 NLT 260
+++
Sbjct: 257 DIS 259
>SB_36553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 33.1 bits (72), Expect = 0.15
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 87 SGDYTCVVSTFMDEDSKTKQMTV-FVPETKFRLIQNKT-DDDTVNVICAAEGVYPAPNLT 260
+G YTC + M D+ T Q+TV + PE + D +++ C A GV P P +T
Sbjct: 239 AGTYTCTATNEMMSDATTVQVTVNYKPEMVSSTTNTSSWDRKVLSLQCKARGV-PLPQIT 297
Query: 261 LATP 272
P
Sbjct: 298 WYNP 301
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Frame = +3
Query: 87 SGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVN-------VICAAEGVYP 245
+G Y C + +++T+ + +V I +K+ D TVN + C ++G YP
Sbjct: 152 TGQYVCTAVNTVTGNTQTRTASTYVMVKYKPSILSKSPDQTVNETTGFLKLTCISDG-YP 210
Query: 246 APNLT 260
P T
Sbjct: 211 TPTFT 215
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 31.1 bits (67), Expect = 0.59
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 87 SGDYTCVVSTFMDEDSKTKQMTV-FVPETKFRLIQNK-TDDDTVNVICAAEGVYPAPNLT 260
+G YTC + M D+ T Q+TV + PE + +++ C A GV P+P +T
Sbjct: 60 AGTYTCTATNEMGSDTTTVQVTVNYKPEIVSSTTNTSFWNKKILSLQCKARGV-PSPQIT 118
Query: 261 LATP 272
P
Sbjct: 119 WYKP 122
>SB_28651| Best HMM Match : ig (HMM E-Value=1.4e-09)
Length = 221
Score = 31.1 bits (67), Expect = 0.59
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 87 SGDYTCVVSTFMDEDSKTKQMTV-FVPETKFRLIQNK-TDDDTVNVICAAEGVYPAPNLT 260
+G YTC + M D+ T Q+TV + PE + +++ C A GV P+P +T
Sbjct: 60 AGTYTCTATNEMGSDTTTVQVTVNYKPEIVSSTTNTSFWNKKILSLQCKARGV-PSPQIT 118
Query: 261 LATP 272
P
Sbjct: 119 WYKP 122
>SB_19226| Best HMM Match : I-set (HMM E-Value=0)
Length = 1500
Score = 30.7 bits (66), Expect = 0.78
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 87 SGDYTCVVSTFMDEDSKTKQMTVFVPE--TKFRLIQNKTDDDTVNVICAAEGVYPAPNLT 260
SG+Y CV S + ++ V P T FR DT+++ C A+G +P P +T
Sbjct: 730 SGEYKCVASNAAGSAEQVIKVYVRGPPNITSFRSSVTGVQGDTISLPCRAKG-FPPPVIT 788
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 30.7 bits (66), Expect = 0.78
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 69 KTNTDISGDYTCVVSTFMDE-DSKTKQMTVFV-PE-TKFRLIQNKTDDDTVNVICAAEGV 239
K + D G Y C+ + + S Q+ VF P+ + + Q T+ + V ++C AEG
Sbjct: 1013 KISRDDHGQYYCLANNSVSNVTSSIAQLNVFFKPDISTYPSPQTITEGENVTLLCVAEG- 1071
Query: 240 YPAPNLTLATPERRLDARF 296
P+P+ + DA++
Sbjct: 1072 RPSPSYQWFKDDSPFDAKY 1090
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +3
Query: 84 ISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDT------VNVICAAEGVYP 245
++G Y CV S+ ED + + V K + N T DT V V C+++ YP
Sbjct: 335 MAGTYVCVASSIYGEDRNSTILIVLYAPVKVNVHFNTTSRDTAVHGESVTVTCSSQ-AYP 393
Query: 246 A 248
A
Sbjct: 394 A 394
>SB_7922| Best HMM Match : SMC_C (HMM E-Value=1.5e-08)
Length = 493
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/76 (22%), Positives = 31/76 (40%)
Frame = -3
Query: 329 EYLPSTSFKLCETRVQPSFRCGQRKVRRGIHSFRRTDDVHRVIIRLILYQPELRLRHEHC 150
+Y+ T F + + P CG V R + + ++ DDV +++ L
Sbjct: 346 KYIDKTDFNVVSEKTLPIGTCGTWDVGRDVKNQQQLDDVRGELLKNCEVLVLAELDDLRA 405
Query: 149 HLFRFRIFVHKSGHYT 102
+ +F+H GH T
Sbjct: 406 PMDDNMVFMHHPGHLT 421
>SB_27842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 383 SSARSGYHKLNMPLGKKPFTIQ--DLLVQRLKCLRQLICSSQRQ 508
+ R G +L+ L +K T +LL+ R+KCL IC ++ Q
Sbjct: 50 NQVRHGIERLHQSLSQKHVTDSNVELLMCRIKCLTSFICLTEIQ 93
>SB_1002| Best HMM Match : OTCace_N (HMM E-Value=0)
Length = 563
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -3
Query: 299 CETRVQPSFRCGQRKVRRGIHSFRRTDDVHRVIIRLILYQPELRLRHEHCHLFRFRIFVH 120
C T ++P G K R +HS R ++RV +R + P LR+ + R R V
Sbjct: 370 CVTVIRPVTMVGDLKNGRTVHSLARLLCLYRVTLRYV-SPPSLRMPDKVKDYVRSRGIVQ 428
Query: 119 KSGHYTSI 96
+ YTS+
Sbjct: 429 E--EYTSL 434
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Frame = +3
Query: 48 HRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQM--TVFVPETKF--RLIQ-NKTDDDTV 212
H +L ++ D+SG YTCV + + ++ T + KF RL + + DT+
Sbjct: 2354 HSSLILMHCPLDLSGKYTCVAENEVGQVQSAARLHITELAIQPKFAERLTNVSISSGDTI 2413
Query: 213 NVICAAEGVYPAPNLTLATPER--RLDARFA 299
+ C G P P + ++ R D+RF+
Sbjct: 2414 VLECRVTG-KPRPQVAWFKDDKEIRQDSRFS 2443
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 57 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTV 155
L I+ T D G+YTC+ + E S T ++ V
Sbjct: 3021 LTIMNTTLDDEGEYTCIAKNKVGEVSCTAELLV 3053
Score = 27.1 bits (57), Expect = 9.6
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +3
Query: 42 KMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTV---FVPETKFRLIQN--KTDDD 206
K L II + G+YTCV ++ +DS + ++ V VP R I N T+ +
Sbjct: 3112 KDRSVLTIIDAKLNDEGEYTCVATSKAGKDSCSVELLVDEAVVPPEFVRKISNIELTEGE 3171
Query: 207 TVNVICAAEGVYPAPNLT 260
G PAP +T
Sbjct: 3172 IARFDVRITGT-PAPEVT 3188
>SB_21023| Best HMM Match : I-set (HMM E-Value=2e-07)
Length = 175
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Frame = +3
Query: 87 SGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVN-------VICAAEGVYP 245
+G Y C + +++T+ + +V I +K+ D TVN + C ++G YP
Sbjct: 91 TGQYVCTAVNTVTGNTQTRTASTYVMVKYKPSILSKSPDQTVNETTGSLKLTCNSDG-YP 149
Query: 246 APNLT 260
AP T
Sbjct: 150 APTST 154
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 54 ALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETK 173
+L IIK + SG+YTC + + + S++ + V P+ K
Sbjct: 2474 SLVIIKVTKEDSGNYTCQAVSSLGKASQSFDLKVEAPKVK 2513
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 441 VNGFFPNGIFSLWYPERAD 385
V +FPNGI SL PE+A+
Sbjct: 1682 VRRYFPNGIVSLLLPEKAN 1700
>SB_23072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.1 bits (57), Expect = 9.6
Identities = 23/93 (24%), Positives = 36/93 (38%)
Frame = -3
Query: 374 GDGKSASLRVTVATAEYLPSTSFKLCETRVQPSFRCGQRKVRRGIHSFRRTDDVHRVIIR 195
G KS SL +TA LP ++ + + G K + FR +
Sbjct: 558 GPKKSGSLAKEPSTAPSLPCDLVAATSAKMYLAGQGGSGKTELAVSMFRGRN-------- 609
Query: 194 LILYQPELRLRHEHCHLFRFRIFVHKSGHYTSI 96
+++ PE L H+HC+ R + HY I
Sbjct: 610 VMVLTPENDLAHDHCNNPRLAVKAQIYHHYLCI 642
>SB_10606| Best HMM Match : I-set (HMM E-Value=0)
Length = 872
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 54 ALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVP 164
+L I+ + + SG+Y C + EDS + + P
Sbjct: 284 SLVIVNSRSSDSGEYVCTARNLLGEDSAVSTVNILNP 320
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,770,630
Number of Sequences: 59808
Number of extensions: 366743
Number of successful extensions: 1564
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1564
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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