Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F13
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   3.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.9  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   6.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   8.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.5  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -3

Query: 137 PAKATPCRPHPKCSGRPRG 81
           P     C+ HP C+  P G
Sbjct: 144 PENVDGCQKHPLCNDDPNG 162


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 322 LNLVEIRSPRTTLTSLLVT 378
           LN+VE+RSP T     L+T
Sbjct: 355 LNMVEVRSPVTPADLRLLT 373


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +3

Query: 381  CLVTLFRQSSFIHPVHVTKPTNHTFIFVTTTSITLFLNLYIILMPANI 524
            C+   F  ++ +HP            +VT  S+ L L +Y +    N+
Sbjct: 983  CMAAEFIIAALLHPQEFNCLKYGVIYYVTVPSMYLLLVIYSVFNMNNV 1030


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +3

Query: 381  CLVTLFRQSSFIHPVHVTKPTNHTFIFVTTTSITLFLNLYIILMPANI 524
            C+   F  ++ +HP            +VT  S+ L L +Y +    N+
Sbjct: 983  CMAAEFIIAALLHPQEFNCLKYGVIYYVTVPSMYLLLVIYSVFNMNNV 1030


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 482 CDRGSSDEDK 453
           C RG +DEDK
Sbjct: 146 CQRGGADEDK 155


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 204 ENTSPPPLSPP 236
           EN +PPP  PP
Sbjct: 727 ENNAPPPPPPP 737



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 569 CDYKLTFLVPVPNKKY 522
           C+ +    VP+PNK Y
Sbjct: 764 CEERGILFVPIPNKYY 779


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 162 PTRPRPCNGPVGMEENTSPPPLSPPLERGMT 254
           P R  P          T+PP  SPP E  +T
Sbjct: 80  PKRSSPILAEKVSVSPTTPPTPSPPPEERLT 110


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +3

Query: 156 SEPTRPRPCNGPVGMEENTSPPPLSPP 236
           S P  P+    P+     TSP    PP
Sbjct: 10  SPPPAPQSAATPISSSGMTSPAAAPPP 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,260
Number of Sequences: 336
Number of extensions: 4166
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)