Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F13
(631 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51330-1|CAA35714.1| 536|Homo sapiens protein ( Human mRNA for ... 36 0.12
D87002-2|BAA19999.1| 205|Homo sapiens POM121-like 2 protein. 34 0.48
BC131561-1|AAI31562.1| 115|Homo sapiens TGFB1-induced anti-apop... 33 0.63
BC058075-1|AAH58075.1| 115|Homo sapiens TGFB1-induced anti-apop... 33 0.63
BC047669-1|AAH47669.1| 115|Homo sapiens TGFB1-induced anti-apop... 33 0.63
AF226728-1|AAF35887.1| 1548|Homo sapiens somatostatin receptor-i... 32 1.5
AF163302-1|AAD45121.1| 2161|Homo sapiens somatostatin receptor i... 32 1.5
AF105277-1|AAD04172.1| 115|Homo sapiens TIAF1 protein. 32 1.9
U15177-1|AAA75509.1| 404|Homo sapiens unknown protein. 31 2.5
AK057898-1|BAB71610.1| 135|Homo sapiens protein ( Homo sapiens ... 31 2.5
BC073961-1|AAH73961.1| 610|Homo sapiens phosphatidylinositol bi... 31 3.4
BC064357-1|AAH64357.1| 610|Homo sapiens phosphatidylinositol bi... 31 3.4
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 31 3.4
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 31 3.4
AF477006-1|AAN03746.1| 599|Homo sapiens myeloid/lymphoid or mix... 31 3.4
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 31 3.4
AB209994-1|BAE06076.1| 641|Homo sapiens KCNC2 variant protein p... 27 3.4
AY118169-1|AAM81577.1| 638|Homo sapiens potassium voltage-gated... 27 3.4
AF268896-1|AAL27272.1| 638|Homo sapiens voltage gated potassium... 27 3.4
AY243473-1|AAO89503.1| 629|Homo sapiens Kv3.2d voltage-gated po... 27 3.4
AF268897-1|AAL27273.1| 613|Homo sapiens voltage gated potassium... 27 3.4
BC111991-1|AAI11992.1| 558|Homo sapiens Shaw-related voltage-ga... 27 3.4
BC093635-1|AAH93635.1| 558|Homo sapiens potassium voltage-gated... 27 3.4
AK094720-1|BAC04407.1| 558|Homo sapiens protein ( Homo sapiens ... 27 3.4
AL591845-2|CAH71860.2| 378|Homo sapiens chromosome 1 open readi... 31 4.5
AK096230-1|BAC04733.1| 253|Homo sapiens protein ( Homo sapiens ... 31 4.5
BC068575-1|AAH68575.1| 673|Homo sapiens vasorin protein. 30 5.9
BC013767-1|AAH13767.1| 601|Homo sapiens VASN protein protein. 30 5.9
AY358299-1|AAQ88666.1| 673|Homo sapiens CSRV314 protein. 30 5.9
AY358298-1|AAQ88665.1| 598|Homo sapiens CSRV314 protein. 30 5.9
AY166584-1|AAO27704.1| 673|Homo sapiens vasorin protein. 30 5.9
Z97653-2|CAB56188.1| 293|Homo sapiens meteorin, glial cell diff... 30 7.8
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 30 7.8
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 30 7.8
U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron pro... 30 7.8
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 30 7.8
U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron pro... 30 7.8
U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known i... 30 7.8
U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy d... 30 7.8
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 30 7.8
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 30 7.8
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 30 7.8
BC094832-1|AAH94832.1| 321|Homo sapiens atonal homolog 8 (Droso... 30 7.8
BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuro... 30 7.8
BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuro... 30 7.8
BC021207-1|AAH21207.1| 321|Homo sapiens atonal homolog 8 (Droso... 30 7.8
BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuro... 30 7.8
BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein. 30 7.8
BC000662-1|AAH00662.1| 293|Homo sapiens meteorin, glial cell di... 30 7.8
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 30 7.8
AK074681-1|BAC11135.1| 321|Homo sapiens protein ( Homo sapiens ... 30 7.8
AK027614-1|BAB55233.1| 321|Homo sapiens protein ( Homo sapiens ... 30 7.8
AF529205-1|AAO85773.1| 321|Homo sapiens basic helix-loop-helix ... 30 7.8
AE006464-15|AAK61247.1| 293|Homo sapiens unknown protein. 30 7.8
AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuro... 30 7.8
AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1... 30 7.8
>X51330-1|CAA35714.1| 536|Homo sapiens protein ( Human mRNA for
transcription factor TFE3 (partial). ).
Length = 536
Score = 35.9 bits (79), Expect = 0.12
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = +1
Query: 25 PCQCGTH--PGESR--SEIPTKTPRGRPLHLGWGR 117
PC CGTH PGE R E+ T +PR P + W R
Sbjct: 461 PCPCGTHPCPGEGRRQDEVSTLSPRDCPSQVSWER 495
>D87002-2|BAA19999.1| 205|Homo sapiens POM121-like 2 protein.
Length = 205
Score = 33.9 bits (74), Expect = 0.48
Identities = 24/70 (34%), Positives = 30/70 (42%)
Frame = +3
Query: 39 DSPGRKSLGNTH*NPPGPSAAFGMGATRGGFRRHRVAPCSEPTRPRPCNGPVGMEENTSP 218
D P S G+T +A A RGG +P S+ +RPR C P+ P
Sbjct: 58 DGPQAVSSGHTQCEKTADTAPGQTLAPRGG------SPISQASRPRRCKFPLLPRRRGEP 111
Query: 219 PPLSPPLERG 248
L PPLE G
Sbjct: 112 LMLPPPLELG 121
>BC131561-1|AAI31562.1| 115|Homo sapiens TGFB1-induced
anti-apoptotic factor 1 protein.
Length = 115
Score = 33.5 bits (73), Expect = 0.63
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 28 CQCGTHPGESRSEI-PTKTPRGRPLHLGWGRHGVA---FAGTASPPAANPPGL 174
C G ESR ++ + RG P+ LGW A G ++PPA PP L
Sbjct: 15 CAAGDAGEESRVQVLKNEVRRGSPVLLGWVEQAYADKCVCGPSAPPAPTPPSL 67
>BC058075-1|AAH58075.1| 115|Homo sapiens TGFB1-induced
anti-apoptotic factor 1 protein.
Length = 115
Score = 33.5 bits (73), Expect = 0.63
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 28 CQCGTHPGESRSEI-PTKTPRGRPLHLGWGRHGVA---FAGTASPPAANPPGL 174
C G ESR ++ + RG P+ LGW A G ++PPA PP L
Sbjct: 15 CAAGDAGEESRVQVLKNEVRRGSPVLLGWVEQAYADKCVCGPSAPPAPTPPSL 67
>BC047669-1|AAH47669.1| 115|Homo sapiens TGFB1-induced
anti-apoptotic factor 1 protein.
Length = 115
Score = 33.5 bits (73), Expect = 0.63
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 28 CQCGTHPGESRSEI-PTKTPRGRPLHLGWGRHGVA---FAGTASPPAANPPGL 174
C G ESR ++ + RG P+ LGW A G ++PPA PP L
Sbjct: 15 CAAGDAGEESRVQVLKNEVRRGSPVLLGWVEQAYADKCVCGPSAPPAPTPPSL 67
>AF226728-1|AAF35887.1| 1548|Homo sapiens somatostatin
receptor-interacting protein splice variant b protein.
Length = 1548
Score = 32.3 bits (70), Expect = 1.5
Identities = 22/52 (42%), Positives = 23/52 (44%)
Frame = -3
Query: 203 LHPYRAIARTRPGGFAAGGDAVPAKATPCRPHPKCSGRPRGVLVGISERLSP 48
L+P R P G AGG A P PHP SG G L G S LSP
Sbjct: 1415 LYPGLFDIRGSPTG-GAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSP 1465
>AF163302-1|AAD45121.1| 2161|Homo sapiens somatostatin receptor
interacting protein splice variant a protein.
Length = 2161
Score = 32.3 bits (70), Expect = 1.5
Identities = 22/52 (42%), Positives = 23/52 (44%)
Frame = -3
Query: 203 LHPYRAIARTRPGGFAAGGDAVPAKATPCRPHPKCSGRPRGVLVGISERLSP 48
L+P R P G AGG A P PHP SG G L G S LSP
Sbjct: 2028 LYPGLFDIRGSPTG-GAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSP 2078
>AF105277-1|AAD04172.1| 115|Homo sapiens TIAF1 protein.
Length = 115
Score = 31.9 bits (69), Expect = 1.9
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +1
Query: 28 CQCGTHPGESRSEI-PTKTPRGRPLHLGWGRHGVA---FAGTASPPAANPPGL 174
C G ESR ++ + RG P+ LGW G ++PPA PP L
Sbjct: 15 CAAGDAGEESRVQVLKNEVRRGSPVLLGWVEQAYVDKCVCGPSAPPAPTPPSL 67
>U15177-1|AAA75509.1| 404|Homo sapiens unknown protein.
Length = 404
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 81 PPGPSAAFGMGATRGGFRRHRVAPCSEPT-RPRPCN 185
PP P+ A GA RRH+ AP + P R PCN
Sbjct: 94 PPRPAGATRTGAPPAEGRRHKAAPHNGPARRSPPCN 129
>AK057898-1|BAB71610.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ25169 fis, clone CBR08739. ).
Length = 135
Score = 31.5 bits (68), Expect = 2.5
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -3
Query: 272 PDC*PAGHASFKRRAKRWRGSILLHPYRAIARTRPG-GFAAGGDAVPAK 129
P C A F+ R +WR L P + R G G AGGD P++
Sbjct: 47 PACLSASGVWFQNRRTKWRKKSALEPSSSTPRAPGGAGAGAGGDRAPSE 95
>BC073961-1|AAH73961.1| 610|Homo sapiens phosphatidylinositol
binding clathrin assembly protein protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.4
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 6 GHGGTNSVPVWDSPGRKSL-GNTH*NPP-GPSAAFGMGATRGGFRRHRVAPCSEPTRPRP 179
G+G T + W PG K L G ++ P P+ A+ AT G + AP P P
Sbjct: 504 GNGTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWN-AATMNGMHFPQYAP---PVMAYP 559
Query: 180 CNGPVGMEENTSPPPL 227
P GM PP +
Sbjct: 560 ATTPTGMIGYGIPPQM 575
>BC064357-1|AAH64357.1| 610|Homo sapiens phosphatidylinositol
binding clathrin assembly protein protein.
Length = 610
Score = 31.1 bits (67), Expect = 3.4
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 6 GHGGTNSVPVWDSPGRKSL-GNTH*NPP-GPSAAFGMGATRGGFRRHRVAPCSEPTRPRP 179
G+G T + W PG K L G ++ P P+ A+ AT G + AP P P
Sbjct: 504 GNGTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWN-AATMNGMHFPQYAP---PVMAYP 559
Query: 180 CNGPVGMEENTSPPPL 227
P GM PP +
Sbjct: 560 ATTPTGMIGYGIPPQM 575
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 3.4
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Frame = +3
Query: 30 PVWDSPGRKSLGNTH*NPPGPSAAFGM------GATRGGFRRHRVAPCSEPTRPRPCNGP 191
P DS S + N P P A F G+ G +R V S P P P
Sbjct: 250 PQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSP 309
Query: 192 VGMEENTSPPPLSPP 236
G + +PPP PP
Sbjct: 310 PGPKPGFAPPPAPPP 324
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 31.1 bits (67), Expect = 3.4
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Frame = +3
Query: 30 PVWDSPGRKSLGNTH*NPPGPSAAFGM------GATRGGFRRHRVAPCSEPTRPRPCNGP 191
P DS S + N P P A F G+ G +R V S P P P
Sbjct: 250 PQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSP 309
Query: 192 VGMEENTSPPPLSPP 236
G + +PPP PP
Sbjct: 310 PGPKPGFAPPPAPPP 324
>AF477006-1|AAN03746.1| 599|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia/clathrin assembly protein fusion
pro protein.
Length = 599
Score = 31.1 bits (67), Expect = 3.4
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 6 GHGGTNSVPVWDSPGRKSL-GNTH*NPP-GPSAAFGMGATRGGFRRHRVAPCSEPTRPRP 179
G+G T + W PG K L G ++ P P+ A+ AT G + AP P P
Sbjct: 493 GNGTTKNDVNWSQPGEKKLTGGSNCEPKVAPTTAWN-AATMNGMHFPQYAP---PVMAYP 548
Query: 180 CNGPVGMEENTSPPPL 227
P GM PP +
Sbjct: 549 ATTPTGMIGYGIPPQM 564
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 31.1 bits (67), Expect = 3.4
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Frame = +3
Query: 30 PVWDSPGRKSLGNTH*NPPGPSAAFGM------GATRGGFRRHRVAPCSEPTRPRPCNGP 191
P DS S + N P P A F G+ G +R V S P P P
Sbjct: 250 PQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPPAPPLGSP 309
Query: 192 VGMEENTSPPPLSPP 236
G + +PPP PP
Sbjct: 310 PGPKPGFAPPPAPPP 324
>AB209994-1|BAE06076.1| 641|Homo sapiens KCNC2 variant protein
protein.
Length = 641
Score = 27.1 bits (57), Expect(2) = 3.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 156 SEPTRPRPCNGPVGMEENTSPPPLSPP 236
SEP P C G + SPPPLSPP
Sbjct: 43 SEP--PGDCLTTAGDKLQPSPPPLSPP 67
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 213 SPPPLSPPLERG 248
SPPP +PPL G
Sbjct: 65 SPPPRAPPLSPG 76
>AY118169-1|AAM81577.1| 638|Homo sapiens potassium voltage-gated
potassium channel subfamily C member 2 protein.
Length = 638
Score = 27.1 bits (57), Expect(2) = 3.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 156 SEPTRPRPCNGPVGMEENTSPPPLSPP 236
SEP P C G + SPPPLSPP
Sbjct: 40 SEP--PGDCLTTAGDKLQPSPPPLSPP 64
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 213 SPPPLSPPLERG 248
SPPP +PPL G
Sbjct: 62 SPPPRAPPLSPG 73
>AF268896-1|AAL27272.1| 638|Homo sapiens voltage gated potassium
channel Kv3.2b protein.
Length = 638
Score = 27.1 bits (57), Expect(2) = 3.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 156 SEPTRPRPCNGPVGMEENTSPPPLSPP 236
SEP P C G + SPPPLSPP
Sbjct: 40 SEP--PGDCLTTAGDKLQPSPPPLSPP 64
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 213 SPPPLSPPLERG 248
SPPP +PPL G
Sbjct: 62 SPPPRAPPLSPG 73
>AY243473-1|AAO89503.1| 629|Homo sapiens Kv3.2d voltage-gated
potassium channel protein.
Length = 629
Score = 27.1 bits (57), Expect(2) = 3.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 156 SEPTRPRPCNGPVGMEENTSPPPLSPP 236
SEP P C G + SPPPLSPP
Sbjct: 40 SEP--PGDCLTTAGDKLQPSPPPLSPP 64
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 213 SPPPLSPPLERG 248
SPPP +PPL G
Sbjct: 62 SPPPRAPPLSPG 73
>AF268897-1|AAL27273.1| 613|Homo sapiens voltage gated potassium
channel Kv3.2a protein.
Length = 613
Score = 27.1 bits (57), Expect(2) = 3.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 156 SEPTRPRPCNGPVGMEENTSPPPLSPP 236
SEP P C G + SPPPLSPP
Sbjct: 40 SEP--PGDCLTTAGDKLQPSPPPLSPP 64
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 213 SPPPLSPPLERG 248
SPPP +PPL G
Sbjct: 62 SPPPRAPPLSPG 73
>BC111991-1|AAI11992.1| 558|Homo sapiens Shaw-related voltage-gated
potassium channel protein 2, isoform KV3.2c protein.
Length = 558
Score = 27.1 bits (57), Expect(2) = 3.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 156 SEPTRPRPCNGPVGMEENTSPPPLSPP 236
SEP P C G + SPPPLSPP
Sbjct: 40 SEP--PGDCLTTAGDKLQPSPPPLSPP 64
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 213 SPPPLSPPLERG 248
SPPP +PPL G
Sbjct: 62 SPPPRAPPLSPG 73
>BC093635-1|AAH93635.1| 558|Homo sapiens potassium voltage-gated
channel, Shaw-related subfamily, member 2 protein.
Length = 558
Score = 27.1 bits (57), Expect(2) = 3.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 156 SEPTRPRPCNGPVGMEENTSPPPLSPP 236
SEP P C G + SPPPLSPP
Sbjct: 40 SEP--PGDCLTTAGDKLQPSPPPLSPP 64
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 213 SPPPLSPPLERG 248
SPPP +PPL G
Sbjct: 62 SPPPRAPPLSPG 73
>AK094720-1|BAC04407.1| 558|Homo sapiens protein ( Homo sapiens
cDNA FLJ37401 fis, clone BRAMY2027717, highly similar to
VOLTAGE-GATED POTASSIUM CHANNEL PROTEIN KV3.2. ).
Length = 558
Score = 27.1 bits (57), Expect(2) = 3.4
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 156 SEPTRPRPCNGPVGMEENTSPPPLSPP 236
SEP P C G + SPPPLSPP
Sbjct: 40 SEP--PGDCLTTAGDKLQPSPPPLSPP 64
Score = 22.6 bits (46), Expect(2) = 3.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3
Query: 213 SPPPLSPPLERG 248
SPPP +PPL G
Sbjct: 62 SPPPRAPPLSPG 73
>AL591845-2|CAH71860.2| 378|Homo sapiens chromosome 1 open reading
frame 113 protein.
Length = 378
Score = 30.7 bits (66), Expect = 4.5
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 177 DEAWWV-RCRGRRGACESHPVSPPSQMQRTAP 85
D+ WW C+GRRG + V PP +++ P
Sbjct: 217 DKGWWEGECQGRRGVFPDNFVLPPPPIKKLVP 248
>AK096230-1|BAC04733.1| 253|Homo sapiens protein ( Homo sapiens
cDNA FLJ38911 fis, clone NT2NE2007220. ).
Length = 253
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -2
Query: 204 PPSLPGHCTDEAWWVR-CRGRR--GACESHPVSPPSQMQRTAPGGFSG 70
PP+ G E +R C RR C+SHP P+ PGGF G
Sbjct: 203 PPA--GQAPSEEGLLRVCGSRRPSSVCDSHPPPTPAHFWEHLPGGFGG 248
>BC068575-1|AAH68575.1| 673|Homo sapiens vasorin protein.
Length = 673
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +3
Query: 90 PSAAFGMGATRGGFRRHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSPPLERGMT 254
PS G G R H C E C +G SP P++P R +T
Sbjct: 411 PSTCLNGGTCHLGTRHHLACLCPEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLT 465
>BC013767-1|AAH13767.1| 601|Homo sapiens VASN protein protein.
Length = 601
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +3
Query: 90 PSAAFGMGATRGGFRRHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSPPLERGMT 254
PS G G R H C E C +G SP P++P R +T
Sbjct: 339 PSTCLNGGTCHLGTRHHLACLCPEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLT 393
>AY358299-1|AAQ88666.1| 673|Homo sapiens CSRV314 protein.
Length = 673
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +3
Query: 90 PSAAFGMGATRGGFRRHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSPPLERGMT 254
PS G G R H C E C +G SP P++P R +T
Sbjct: 411 PSTCLNGGTCHLGTRHHLACLCPEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLT 465
>AY358298-1|AAQ88665.1| 598|Homo sapiens CSRV314 protein.
Length = 598
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +3
Query: 90 PSAAFGMGATRGGFRRHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSPPLERGMT 254
PS G G R H C E C +G SP P++P R +T
Sbjct: 336 PSTCLNGGTCHLGTRHHLACLCPEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLT 390
>AY166584-1|AAO27704.1| 673|Homo sapiens vasorin protein.
Length = 673
Score = 30.3 bits (65), Expect = 5.9
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +3
Query: 90 PSAAFGMGATRGGFRRHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSPPLERGMT 254
PS G G R H C E C +G SP P++P R +T
Sbjct: 411 PSTCLNGGTCHLGTRHHLACLCPEGFTGLYCESQMGQGTRPSPTPVTPRPPRSLT 465
>Z97653-2|CAB56188.1| 293|Homo sapiens meteorin, glial cell
differentiation regulator protein.
Length = 293
Score = 29.9 bits (64), Expect = 7.8
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +1
Query: 4 GGTEGRTPCQCGTHPGESRSEIPTKTPRGRPLHLGWGRHGVAFAGTA 144
G T RTP +CG HPG G L +GW R G A G A
Sbjct: 232 GLTSIRTPLRCGVHPGP-----------GTFLFMGWSRFGEARLGCA 267
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 29.9 bits (64), Expect = 7.8
Identities = 33/103 (32%), Positives = 38/103 (36%), Gaps = 10/103 (9%)
Frame = +3
Query: 3 RGHGGTNSVPVWDSPGRKSLGNTH*NPPGPSAAFGMGATRG--GFRRHRVAPCSEPTRPR 176
RG G P D K PPGP A G T G G + HR P + +
Sbjct: 173 RGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGE 232
Query: 177 P----CNGPVGME-ENTSPPPLSP---PLERGMTCWSTIRGGR 281
G G EN SP P+ P P ERG T + G R
Sbjct: 233 AGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGAR 275
>X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for
alpha-1 type II collagen. ).
Length = 1418
Score = 29.9 bits (64), Expect = 7.8
Identities = 33/103 (32%), Positives = 38/103 (36%), Gaps = 10/103 (9%)
Frame = +3
Query: 3 RGHGGTNSVPVWDSPGRKSLGNTH*NPPGPSAAFGMGATRG--GFRRHRVAPCSEPTRPR 176
RG G P D K PPGP A G T G G + HR P + +
Sbjct: 173 RGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGE 232
Query: 177 P----CNGPVGME-ENTSPPPLSP---PLERGMTCWSTIRGGR 281
G G EN SP P+ P P ERG T + G R
Sbjct: 233 AGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGAR 275
>U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron
protein SMN protein.
Length = 294
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 PTRPRPCNGP--VGMEENTSPPPLSPPLERGMTCW 260
P P P GP G++ N PPP PP ++CW
Sbjct: 198 PPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCW 232
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 3 RGHGGTNSVPVWDSPGRKSLGNTH*NPPGPSAAFGMGATRG 125
RGH G +P + + G S G PPGP G +G
Sbjct: 926 RGHQGEQGLPGFSTSGSSSFGLNLQGPPGPPGPQGPKGDKG 966
>U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron
protein.
Length = 294
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 PTRPRPCNGP--VGMEENTSPPPLSPPLERGMTCW 260
P P P GP G++ N PPP PP ++CW
Sbjct: 198 PPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCW 232
>U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known if
this copy of the gene protein.
Length = 293
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 PTRPRPCNGP--VGMEENTSPPPLSPPLERGMTCW 260
P P P GP G++ N PPP PP ++CW
Sbjct: 197 PPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCW 231
>U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy
determining gene protein.
Length = 294
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 PTRPRPCNGP--VGMEENTSPPPLSPPLERGMTCW 260
P P P GP G++ N PPP PP ++CW
Sbjct: 198 PPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCW 232
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 3 RGHGGTNSVPVWDSPGRKSLGNTH*NPPGPSAAFGMGATRG 125
RGH G +P + + G S G PPGP G +G
Sbjct: 961 RGHQGEQGLPGFSTSGSSSFGLNLQGPPGPPGPQGPKGDKG 1001
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 29.9 bits (64), Expect = 7.8
Identities = 33/103 (32%), Positives = 38/103 (36%), Gaps = 10/103 (9%)
Frame = +3
Query: 3 RGHGGTNSVPVWDSPGRKSLGNTH*NPPGPSAAFGMGATRG--GFRRHRVAPCSEPTRPR 176
RG G P D K PPGP A G T G G + HR P + +
Sbjct: 242 RGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGE 301
Query: 177 P----CNGPVGME-ENTSPPPLSP---PLERGMTCWSTIRGGR 281
G G EN SP P+ P P ERG T + G R
Sbjct: 302 AGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGAR 344
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 29.9 bits (64), Expect = 7.8
Identities = 33/103 (32%), Positives = 38/103 (36%), Gaps = 10/103 (9%)
Frame = +3
Query: 3 RGHGGTNSVPVWDSPGRKSLGNTH*NPPGPSAAFGMGATRG--GFRRHRVAPCSEPTRPR 176
RG G P D K PPGP A G T G G + HR P + +
Sbjct: 242 RGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGE 301
Query: 177 P----CNGPVGME-ENTSPPPLSP---PLERGMTCWSTIRGGR 281
G G EN SP P+ P P ERG T + G R
Sbjct: 302 AGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGAR 344
>BC094832-1|AAH94832.1| 321|Homo sapiens atonal homolog 8
(Drosophila) protein.
Length = 321
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +3
Query: 81 PPGPSAAFGMGATRGGFR----RHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSPPLERG 248
PP P + G FR R R+ C+ P RP P P S +PP G
Sbjct: 129 PPAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPAPPESTVRPAPPTRPG 188
Query: 249 MTCWSTI 269
+ +S+I
Sbjct: 189 ESSYSSI 195
>BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuron
2, centromeric protein.
Length = 282
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 PTRPRPCNGP--VGMEENTSPPPLSPPLERGMTCW 260
P P P GP G++ N PPP PP ++CW
Sbjct: 198 PPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCW 232
>BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 PTRPRPCNGP--VGMEENTSPPPLSPPLERGMTCW 260
P P P GP G++ N PPP PP ++CW
Sbjct: 198 PPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCW 232
>BC021207-1|AAH21207.1| 321|Homo sapiens atonal homolog 8
(Drosophila) protein.
Length = 321
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +3
Query: 81 PPGPSAAFGMGATRGGFR----RHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSPPLERG 248
PP P + G FR R R+ C+ P RP P P S +PP G
Sbjct: 129 PPAPQSQAPGGPEAQPFREPGPRPRILLCAPPARPAPSAPPAPPAPPESTVRPAPPTRPG 188
Query: 249 MTCWSTI 269
+ +S+I
Sbjct: 189 ESSYSSI 195
>BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 PTRPRPCNGP--VGMEENTSPPPLSPPLERGMTCW 260
P P P GP G++ N PPP PP ++CW
Sbjct: 198 PPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCW 232
>BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein.
Length = 282
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 PTRPRPCNGP--VGMEENTSPPPLSPPLERGMTCW 260
P P P GP G++ N PPP PP ++CW
Sbjct: 198 PPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCW 232
>BC000662-1|AAH00662.1| 293|Homo sapiens meteorin, glial cell
differentiation regulator protein.
Length = 293
Score = 29.9 bits (64), Expect = 7.8
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +1
Query: 4 GGTEGRTPCQCGTHPGESRSEIPTKTPRGRPLHLGWGRHGVAFAGTA 144
G T RTP +CG HPG G L +GW R G A G A
Sbjct: 232 GLTSIRTPLRCGVHPGP-----------GTFLFMGWSRFGEARLGCA 267
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 3 RGHGGTNSVPVWDSPGRKSLGNTH*NPPGPSAAFGMGATRG 125
RGH G +P + + G S G PPGP G +G
Sbjct: 926 RGHQGEQGLPGFSTSGSSSFGLNLQGPPGPPGPQGPKGDKG 966
>AK074681-1|BAC11135.1| 321|Homo sapiens protein ( Homo sapiens
cDNA FLJ90200 fis, clone MAMMA1001615, weakly similar to
NEUROGENIC DIFFERENTIATION FACTOR 1. ).
Length = 321
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +3
Query: 81 PPGPSAAFGMGATRGGFR----RHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSPPLERG 248
PP P + G FR R R+ C+ P RP P P S +PP G
Sbjct: 129 PPAPQSQAPGGPEAQPFREPGPRPRILLCAPPARPAPSAPPAPPAPPESTVRPAPPTRPG 188
Query: 249 MTCWSTI 269
+ +S+I
Sbjct: 189 ESSYSSI 195
>AK027614-1|BAB55233.1| 321|Homo sapiens protein ( Homo sapiens
cDNA FLJ14708 fis, clone NT2RP3000603, weakly similar to
NEUROGENIC DIFFERENTIATION FACTOR 1. ).
Length = 321
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +3
Query: 81 PPGPSAAFGMGATRGGFR----RHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSPPLERG 248
PP P + G FR R R+ C+ P RP P P S +PP G
Sbjct: 129 PPAPQSQAPGGPEAQPFREPGPRPRILLCAPPARPAPSAPPAPPAPPESTVRPAPPTRPG 188
Query: 249 MTCWSTI 269
+ +S+I
Sbjct: 189 ESSYSSI 195
>AF529205-1|AAO85773.1| 321|Homo sapiens basic helix-loop-helix
transcription factor protein.
Length = 321
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Frame = +3
Query: 81 PPGPSAAFGMGATRGGFR----RHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSPPLERG 248
PP P + G FR R R+ C+ P RP P P S +PP G
Sbjct: 129 PPAPQSQAPGGPEAQPFREPGPRPRILLCAPPARPAPSAPPAPPAPPESTVRPAPPTRPG 188
Query: 249 MTCWSTI 269
+ +S+I
Sbjct: 189 ESSYSSI 195
>AE006464-15|AAK61247.1| 293|Homo sapiens unknown protein.
Length = 293
Score = 29.9 bits (64), Expect = 7.8
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +1
Query: 4 GGTEGRTPCQCGTHPGESRSEIPTKTPRGRPLHLGWGRHGVAFAGTA 144
G T RTP +CG HPG G L +GW R G A G A
Sbjct: 232 GLTSIRTPLRCGVHPGP-----------GTFLFMGWSRFGEARLGCA 267
>AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuron 1
product protein.
Length = 294
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 PTRPRPCNGP--VGMEENTSPPPLSPPLERGMTCW 260
P P P GP G++ N PPP PP ++CW
Sbjct: 198 PPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCW 232
>AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1
protein protein.
Length = 294
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 162 PTRPRPCNGP--VGMEENTSPPPLSPPLERGMTCW 260
P P P GP G++ N PPP PP ++CW
Sbjct: 198 PPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCW 232
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,870,486
Number of Sequences: 237096
Number of extensions: 3052952
Number of successful extensions: 11036
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 9259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10993
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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