Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F13
         (631 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.1  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   1.9  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   1.9  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   1.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   7.5  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   9.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 161  FAAGGDAVPAKATPCRPHPKCSGRPRGVLVGIS 63
            F   GD VP   T C+      G P  + V +S
Sbjct: 1193 FTRVGDGVPTTVTYCQTEEDVPGSPADIKVVVS 1225


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -3

Query: 161  FAAGGDAVPAKATPCRPHPKCSGRPRGVLVGIS 63
            F   GD VP   T C+      G P  + V +S
Sbjct: 1189 FTRVGDGVPTTVTYCQTEEDVPGSPADIKVVVS 1221


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 318 VLEKGQVKRTRTSCPPGLLT 259
           VL+ G V  T+  C P LLT
Sbjct: 137 VLDSGLVNNTQPMCSPKLLT 156


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 318 VLEKGQVKRTRTSCPPGLLT 259
           VL+ G V  T+  C P LLT
Sbjct: 137 VLDSGLVNNTQPMCSPKLLT 156


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 318 VLEKGQVKRTRTSCPPGLLT 259
           VL+ G V  T+  C P LLT
Sbjct: 137 VLDSGLVNNTQPMCSPKLLT 156


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 318 VLEKGQVKRTRTSCPPGLLT 259
           VL+ G V   +  C P LLT
Sbjct: 143 VLDSGLVNNNQPMCSPKLLT 162


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = +1

Query: 28  CQCGTHPGESRSEIPTKTPRGRP 96
           C C    GE  + +    PR +P
Sbjct: 75  CMCCQESGEREASVSLFCPRAKP 97


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 413 ERRLTKQSYKANVTSKLVRVV 351
           ER  TK    AN+ SKL + V
Sbjct: 518 ERGTTKSMEAANIMSKLPKTV 538


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,013
Number of Sequences: 438
Number of extensions: 5342
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)