Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F13
(631 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g05350.1 68418.m00576 expressed protein contains Pfam profile... 32 0.27
At2g23240.2 68415.m02776 plant EC metallothionein-like family 15... 32 0.27
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 31 0.83
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 30 1.1
At2g28550.1 68415.m03468 AP2 domain-containing transcription fac... 30 1.5
At5g55020.1 68418.m06853 myb family transcription factor (MYB120... 29 1.9
At1g22490.1 68414.m02810 basic helix-loop-helix (bHLH) family pr... 29 1.9
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 29 2.5
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 29 2.5
At2g42000.1 68415.m05195 plant EC metallothionein-like family 15... 29 3.4
At5g04770.1 68418.m00492 amino acid permease family protein simi... 28 4.4
At2g23240.1 68415.m02775 plant EC metallothionein-like family 15... 28 4.4
At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identi... 28 5.9
At2g18910.1 68415.m02206 hydroxyproline-rich glycoprotein family... 28 5.9
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 27 7.8
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 27 7.8
>At5g05350.1 68418.m00576 expressed protein contains Pfam profile
PF04749: Protein of unknown function, DUF614; expression
supported by MPSS
Length = 526
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 315 LEKGQVKRTRTSCPPGLLTSRSCLFQEAG*EVEGKYSPPSLP 190
+++ ++ +TR SCPP L TS L E E ++S SLP
Sbjct: 4 VDEVEISKTRVSCPPALSTSHKILISE---EKPRRWSESSLP 42
>At2g23240.2 68415.m02776 plant EC metallothionein-like family 15
protein identical to EC protein homolog 2 (SP:Q42377)
{Arabidopsis thaliana}; identical to an EST:
GB:X92116:ATECPRHOM; contains a vertebrate
metallothionein signature (PS00203); contains Pfam
profile PF02068: Plant PEC family metallothionein
Length = 84
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 81 PPGPSAAFGMGATRGGFRRHRVAPCSEPTRPRPCNGP 191
P G S M GG + H PC E PCN P
Sbjct: 24 PGGESCRLMMSEASGGDQEHNTCPCGEHCGCNPCNCP 60
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 30.7 bits (66), Expect = 0.83
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 150 PCSEPTRPRPCNGPVGMEENTSPPPLSPP 236
PC P P PC P + PP L PP
Sbjct: 69 PCPPPPSPPPCPPPPSPPPSPPPPQLPPP 97
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +3
Query: 141 RVAPCSEPTRP--RPCNGPVGMEENTSPPPLSPP 236
+VAP P P +P P SPPP+SPP
Sbjct: 86 KVAPVISPATPPPQPPQSPPASAPTVSPPPVSPP 119
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +3
Query: 81 PPGPSAAFGMGATRGGFRRHRVAPCSEPTRPRPCNGPVGMEENTSPPPLSP 233
PP P+ A + +RH AP P P P + PV + + P SP
Sbjct: 165 PPAPAPAPTKHKRKHKHKRHHHAPAPAPIPPSPPSPPVLTDPQDTAPAPSP 215
>At2g28550.1 68415.m03468 AP2 domain-containing transcription factor
RAP2.7 (RAP2.7) nearly identical to AP2 domain
transcription factor RAP2.7 (GI:2281639) [Arabidopsis
thaliana]
Length = 449
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +1
Query: 28 CQCGTHPGESRSEIPTKTPRGRPLHLGWGRHGVAFAGTASPPAANPPGLVRAMA 189
C +P E R+ G + GW R G A PP PP L A
Sbjct: 370 CPSYNNPAEGRATEKRSEAEGMMSNWGWQRPGQTSAVRPQPPGPQPPPLFSVAA 423
>At5g55020.1 68418.m06853 myb family transcription factor (MYB120)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 523
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = +3
Query: 51 RKSLGNTH*NPPGPSAAFGMGATRGGFRRHRV-APCSEPTRPRPCNGPVGMEENTSPPPL 227
+ S NT + P PS + F H A P P N P + PPPL
Sbjct: 180 QSSQRNTPSSSPLPSPTPANAKSSSSFTFHTTTANLLHPLSPHTPNTPSQLSSTPPPPPL 239
Query: 228 SPPL 239
S PL
Sbjct: 240 SSPL 243
>At1g22490.1 68414.m02810 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 304
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 339 YLDQIEDVLEKGQVKRTRTSCPPGLLTSRSCL 244
Y+ ++E +L+ + KRTRT P G TS S L
Sbjct: 159 YVKELEHILQSMEPKRTRTHDPKGDKTSTSSL 190
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +3
Query: 45 PGRKSLGNTH*NPPGPSAAFGMGATRGGFRRHRVAPCSEPTRPRPCNGPVGMEENTSPPP 224
P +K L T NPP P +R G + S P P P P+ N + PP
Sbjct: 627 PPKKLLATT--NPPPPPPPPLHSNSRMGAPTSSLVLKSPPVPPPPAPAPLSRSHNGNIPP 684
Query: 225 L-SPPL 239
+ PPL
Sbjct: 685 VPGPPL 690
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 159 EPTRPRPCNGPVGMEENTSPPPLSPP 236
+PT P P P+ ++++ +PPP PP
Sbjct: 240 DPTPPPPPPPPIPVKQSATPPPPPPP 265
>At2g42000.1 68415.m05195 plant EC metallothionein-like family 15
protein 84 C-terminal residues identical to EC protein
homolog 1 (SP:P93746) {Arabidopsis thaliana}; contains
Pfam PF02068: Plant PEC family metallothionein profile;
Length = 115
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 81 PPGPSAAFGMGATRGGFRRHRVAPCSEPTRPRPCNGP 191
P G S M G + H V PC E PCN P
Sbjct: 55 PGGNSCRCRMREASAGDQGHMVCPCGEHCGCNPCNCP 91
>At5g04770.1 68418.m00492 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 583
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 369 ARHICLVTLFRQSSF----IHPVHVTKPTNHTFIFVTTTSITLFLNLYIIL 509
AR++C++ R F IHP T TF+ + T ++ LF +L ++L
Sbjct: 368 ARYMCVIGRSRVVPFWFAKIHPKTSTPVNASTFLGIFTAALALFTDLNVLL 418
>At2g23240.1 68415.m02775 plant EC metallothionein-like family 15
protein identical to EC protein homolog 2 (SP:Q42377)
{Arabidopsis thaliana}; identical to an EST:
GB:X92116:ATECPRHOM; contains a vertebrate
metallothionein signature (PS00203); contains Pfam
profile PF02068: Plant PEC family metallothionein
Length = 85
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 108 MGATRGGFRRHRVAPCSEPTRPRPCNGP 191
M GG + H PC E PCN P
Sbjct: 34 MSEASGGDQEHNTCPCGEHCGCNPCNCP 61
>At5g45680.1 68418.m05616 FK506-binding protein 1 (FKBP13) identical
to Probable FKBP-type peptidyl-prolyl cis-trans
isomerase 3, chloroplast precursor (Ppiase) (Rotamase)
(SP:Q9SCY2) / FK506 binding protein 1 (GI:21535744)
[Arabidopsis thaliana]; contains Pfam PF00254:
peptidyl-prolyl cis-trans isomerase, FKBP-type
Length = 208
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/48 (37%), Positives = 20/48 (41%)
Frame = -1
Query: 223 GGGEVFSSIPTGPLHGRGLVGSLQGATRCLRKPPRVAPIPNAADGPGG 80
G GEV G L G+ L G R LR PP +A A GG
Sbjct: 141 GVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGG 188
>At2g18910.1 68415.m02206 hydroxyproline-rich glycoprotein family
protein
Length = 131
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 162 PTRPRPCNGPVGMEEN-TSPPPLSPPLERGMTCWSTIRGGRMYGFF 296
P P+P P + + PP+ PP ++ + S+ + G + GFF
Sbjct: 27 PATPKPPESPSAVSQKPVMAPPVLPPPQQFKSVASSDQDGSVLGFF 72
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 375 HICLVTL-FRQSSFIHPVHVTKPTNHTFIF 461
HI ++ + ++ S HP+HV TN T I+
Sbjct: 345 HILILCMSWKYSKIYHPIHVINSTNWTIIY 374
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 150 PCSEPTRPRPCNGPVGMEENTSPPPLSPP 236
P PT P P + P SPPP SPP
Sbjct: 65 PPPPPTSPPPPSPPPPSPPPPSPPPPSPP 93
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,443,959
Number of Sequences: 28952
Number of extensions: 388398
Number of successful extensions: 1334
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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