Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F11
         (523 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   1.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   3.3  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 288 ITCEPITENDVRNLYYNGSMIYEK*ILYYNITS 190
           ITC+ +T+   RNL  +  +IYE   + Y+  S
Sbjct: 12  ITCQGVTDIHSRNLTNSLKVIYEWKYIDYDFGS 44


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -3

Query: 221 KNKYYTTILLAVAAALPAWNSDNLLVYVLPLDVNSTSLPTFI 96
           + K  TT+ + ++A +  W    +L  V P   N  ++P F+
Sbjct: 367 ERKASTTLGIIMSAFIVCWLPFFVLALVRPFLKNPDAIPAFL 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,503
Number of Sequences: 438
Number of extensions: 2758
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)