BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F10
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 40 7e-04
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 39 0.002
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 36 0.016
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 32 0.26
Z68114-6|CAA92160.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.45
AC024772-5|AAF60539.1| 407|Caenorhabditis elegans Hypothetical ... 30 0.78
AC024772-4|AAL32240.2| 441|Caenorhabditis elegans Hypothetical ... 30 0.78
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 30 1.0
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 30 1.0
AF022971-2|AAG23980.1| 327|Caenorhabditis elegans Seven tm rece... 29 1.4
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 29 1.8
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 29 2.4
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 28 3.2
AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical ... 28 4.2
AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical ... 27 7.3
AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical ... 27 7.3
AF000265-2|AAO38667.1| 887|Caenorhabditis elegans Paz/piwi doma... 27 7.3
AF000265-1|AAB52946.2| 913|Caenorhabditis elegans Paz/piwi doma... 27 7.3
Z68219-8|CAD59155.1| 430|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z68219-1|CAA92481.2| 387|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z68216-7|CAD59147.1| 430|Caenorhabditis elegans Hypothetical pr... 27 9.7
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 27 9.7
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 40.3 bits (90), Expect = 7e-04
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 107 GNDTKITQYPWLVVIEYESFD-HMKLLCGGSLISSKYVLTAAHC 235
GN T + PW V I ++ +++CGG+LI+ K+VLTAAHC
Sbjct: 37 GNPTHLA--PWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHC 78
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +2
Query: 107 GNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLG 286
G+++ +PW V + H CGGSLI +VLTAAHC A T +VR+G
Sbjct: 61 GSESSPHSWPWTVQLLSRLGHHR---CGGSLIDPNFVLTAAHCF--AKDRRPTSYSVRVG 115
Query: 287 EYNTTNNGP 313
+ + + P
Sbjct: 116 GHRSGSGSP 124
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 50 IFSTVSYILLISVNLIRARGNDTKITQYPWLVVIEYESFDHMKLL-CGGSLISSKYVLTA 226
I + Y L I + G D ++ PW V S D C G+++S +++L A
Sbjct: 147 ILEMILYWLRIPFSAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIA 206
Query: 227 AHCVTG 244
HC G
Sbjct: 207 THCFAG 212
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 31.9 bits (69), Expect = 0.26
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 113 DTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAH 232
++KI +PW V + + + GGS+IS +++TAAH
Sbjct: 22 ESKIKNFPWAVSFTVDGVNRL----GGSIISPYHIITAAH 57
>Z68114-6|CAA92160.1| 316|Caenorhabditis elegans Hypothetical
protein F17A2.9 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.45
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -1
Query: 384 CGIVXSIGAVTTGCAQSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAVSTYF 208
C ++ I +V T C L P+ + Y P R F + S ++Q + + TYF
Sbjct: 45 CNLICQIISVATLCLLQLRQVSNLSPMEIWCYGPIRHFSAITSYLFYVLSQISTLMTYF 103
>AC024772-5|AAF60539.1| 407|Caenorhabditis elegans Hypothetical
protein Y40C5A.4a protein.
Length = 407
Score = 30.3 bits (65), Expect = 0.78
Identities = 23/94 (24%), Positives = 39/94 (41%)
Frame = -1
Query: 390 SGCGIVXSIGAVTTGCAQSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAVSTY 211
SGC + SI + C Q + S L V+ + RT F V I ++ + +T
Sbjct: 75 SGCDVFISICYIAIMCVQVYTDYFVSFKLLVLWHDYLRTAFTVSHITLSAASFLLMAATV 134
Query: 210 FELMSEPPHSSFI*SKLSYSITTSHGYWVIFVSF 109
+ + + KL + I +H +V+F F
Sbjct: 135 ERYLQSTADNRTL--KL-FQILATHRTYVVFCCF 165
>AC024772-4|AAL32240.2| 441|Caenorhabditis elegans Hypothetical
protein Y40C5A.4b protein.
Length = 441
Score = 30.3 bits (65), Expect = 0.78
Identities = 23/94 (24%), Positives = 39/94 (41%)
Frame = -1
Query: 390 SGCGIVXSIGAVTTGCAQSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAVSTY 211
SGC + SI + C Q + S L V+ + RT F V I ++ + +T
Sbjct: 75 SGCDVFISICYIAIMCVQVYTDYFVSFKLLVLWHDYLRTAFTVSHITLSAASFLLMAATV 134
Query: 210 FELMSEPPHSSFI*SKLSYSITTSHGYWVIFVSF 109
+ + + KL + I +H +V+F F
Sbjct: 135 ERYLQSTADNRTL--KL-FQILATHRTYVVFCCF 165
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 29.9 bits (64), Expect = 1.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 182 LCGGSLISSKYVLTAAHCV 238
+CGG LI+ V+T+AHCV
Sbjct: 45 VCGGVLIAPSIVITSAHCV 63
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +2
Query: 107 GNDTKITQYPWLVVIE-YESFDHMKLL----CGGSLISSKYVLTAAHC 235
G +I + PW V I Y + ++ C G+L S +++LTA HC
Sbjct: 44 GRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHC 91
>AF022971-2|AAG23980.1| 327|Caenorhabditis elegans Seven tm
receptor protein 46 protein.
Length = 327
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Frame = +2
Query: 113 DTKITQYPWLVVIEYESFDHMK------LLCGGSLISSKYVL 220
D ITQ V+I Y S D ++ ++CGGSL++ +YV+
Sbjct: 171 DLDITQTARFVLIPYASDDSLRWRNLSFIICGGSLLTVQYVI 212
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 299 TNNGPDCMKGTKDCAHPVV-TAPIEXTIPHPDYIPNDVQGRHDIALIR 439
T P+ ++ C H V + PI+ +P Y +DV+ +DI IR
Sbjct: 38 TRLSPNLLQNITTCTHLVYGSIPIDRDTGYPQYSVSDVESGYDIDNIR 85
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +2
Query: 137 WLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV----TGAILIEGTPKNVR 280
W+ + + +LCG ++I +++TAAHC T + + PKN R
Sbjct: 50 WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSFVYVREPKNNR 101
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 107 GNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 235
G +T +PW + ++ CG S++ +++TAAHC
Sbjct: 30 GFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITAAHC 70
>AC084153-7|AAK84593.1| 451|Caenorhabditis elegans Hypothetical
protein Y22D7AL.4 protein.
Length = 451
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 339 QSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAVSTYFELM 199
Q L P S P V++SP+ T FG P AP A + Y E +
Sbjct: 402 QGLTP-ASSLPYSKVVHSPRPTLFGFPFTGGAPKPSRQAFAAYMEAL 447
>AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical
protein F56A6.1b protein.
Length = 856
Score = 27.1 bits (57), Expect = 7.3
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Frame = +2
Query: 173 MKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLGEYNT--------TNNGPDCMKG 328
M ++ G +K V+T CV LI+ T +V EY + ++G
Sbjct: 191 MNIIVSGPAFENKNVITVGACVH--YLIDPTGVDVAYKEYPEGQLYSGVGVSKSVKTLEG 248
Query: 329 T-KDCAHPVVTAPIEXTIPHPDYIP 400
T K +T ++ T+ HPDY P
Sbjct: 249 TDKKVPSLFMTTEMKTTLFHPDYAP 273
>AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical
protein F56A6.1a protein.
Length = 887
Score = 27.1 bits (57), Expect = 7.3
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Frame = +2
Query: 173 MKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLGEYNT--------TNNGPDCMKG 328
M ++ G +K V+T CV LI+ T +V EY + ++G
Sbjct: 191 MNIIVSGPAFENKNVITVGACVH--YLIDPTGVDVAYKEYPEGQLYSGVGVSKSVKTLEG 248
Query: 329 T-KDCAHPVVTAPIEXTIPHPDYIP 400
T K +T ++ T+ HPDY P
Sbjct: 249 TDKKVPSLFMTTEMKTTLFHPDYAP 273
>AF000265-2|AAO38667.1| 887|Caenorhabditis elegans Paz/piwi
domain-containing protein1, isoform c protein.
Length = 887
Score = 27.1 bits (57), Expect = 7.3
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Frame = +2
Query: 173 MKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLGEYNT--------TNNGPDCMKG 328
M ++ G +K V+T CV LI+ T +V EY + ++G
Sbjct: 191 MNIIVSGPAFENKNVITVGACVH--YLIDPTVVDVAYKEYAEGQLYSGVGASKSVKTLEG 248
Query: 329 T-KDCAHPVVTAPIEXTIPHPDYIP 400
T K +T ++ T+ HPDY P
Sbjct: 249 TDKKVPSLFMTTEMKTTLFHPDYAP 273
>AF000265-1|AAB52946.2| 913|Caenorhabditis elegans Paz/piwi
domain-containing protein1, isoform a protein.
Length = 913
Score = 27.1 bits (57), Expect = 7.3
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Frame = +2
Query: 173 MKLLCGGSLISSKYVLTAAHCVTGAILIEGTPKNVRLGEYNT--------TNNGPDCMKG 328
M ++ G +K V+T CV LI+ T +V EY + ++G
Sbjct: 217 MNIIVSGPAFENKNVITVGACVH--YLIDPTVVDVAYKEYAEGQLYSGVGASKSVKTLEG 274
Query: 329 T-KDCAHPVVTAPIEXTIPHPDYIP 400
T K +T ++ T+ HPDY P
Sbjct: 275 TDKKVPSLFMTTEMKTTLFHPDYAP 299
>Z68219-8|CAD59155.1| 430|Caenorhabditis elegans Hypothetical
protein T05A1.1a protein.
Length = 430
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 345 CAQSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAV 220
CA +++ + S P+ + K+ FF P K+ P+ Q A++
Sbjct: 112 CASNVLMCLTSLPITFITNVYKQWFFSSPVCKLIPLVQGASI 153
>Z68219-1|CAA92481.2| 387|Caenorhabditis elegans Hypothetical
protein T05A1.1b protein.
Length = 387
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 345 CAQSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAV 220
CA +++ + S P+ + K+ FF P K+ P+ Q A++
Sbjct: 69 CASNVLMCLTSLPITFITNVYKQWFFSSPVCKLIPLVQGASI 110
>Z68216-7|CAD59147.1| 430|Caenorhabditis elegans Hypothetical
protein T05A1.1a protein.
Length = 430
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 345 CAQSLVPFMQSGPLFVVLYSPKRTFFGVPSIKIAPVTQCAAV 220
CA +++ + S P+ + K+ FF P K+ P+ Q A++
Sbjct: 112 CASNVLMCLTSLPITFITNVYKQWFFSSPVCKLIPLVQGASI 153
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 26.6 bits (56), Expect = 9.7
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = -3
Query: 160 LIFDHHKPWIL 128
++FDHH PW++
Sbjct: 105 IVFDHHSPWVM 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,288,159
Number of Sequences: 27780
Number of extensions: 269257
Number of successful extensions: 749
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -