Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F08
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              26   0.25 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.0  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.3  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +3

Query: 117 FSLFDKDGDGTITTKELGTVMRS--LGQNPTEAELQDMINEVDADGNGTIDFPEF 275
           FS +D++ +G +  +EL     +  L +      L  MI+  D DG+G ++  EF
Sbjct: 242 FSHYDRNNNGNLEREELEQFAENEDLEELCRGCNLGHMISYDDTDGDGKLNVNEF 296


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 59  LIYNGGSTYGRTNRRIQ 109
           L +N GSTYG + +R Q
Sbjct: 236 LAFNSGSTYGVSGQRWQ 252


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 149 HHNQRAWHRHEIPRTKPHRSRTSR 220
           HH     H H  P+   H+S+  +
Sbjct: 169 HHQMHTQHPHMQPQQGQHQSQAQQ 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,230
Number of Sequences: 438
Number of extensions: 2359
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)