SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F06
         (644 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038507-1|AAH38507.2|  669|Homo sapiens GLS protein protein.          31   3.5  
AF327434-1|AAG47842.1|  669|Homo sapiens glutaminase protein.          31   3.5  
AF279697-1|AAG17700.1|  242|Homo sapiens glutaminase protein.          31   3.5  
AF223943-1|AAF33825.1|  669|Homo sapiens glutaminase kidney isof...    31   3.5  
AF158555-1|AAD47056.1|  598|Homo sapiens glutaminase C protein.        31   3.5  
AF097492-1|AAF00088.1|  527|Homo sapiens glutaminase isoform C p...    31   3.5  
AB020645-1|BAA74861.2|  677|Homo sapiens KIAA0838 protein protein.     31   3.5  
X98033-1|CAA66656.1|  852|Homo sapiens E6-AP protein.                  30   8.1  
X98032-1|CAA66655.1|  852|Homo sapiens E6-AP protein.                  30   8.1  
X98031-1|CAA66654.1|  852|Homo sapiens E6-AP protein.                  30   8.1  
X98021-1|CAA66653.1|  852|Homo sapiens E6-AP protein.                  30   8.1  
U84404-1|AAB49301.1|  852|Homo sapiens E6-associated protein E6-...    30   8.1  
L07557-1|AAA35542.1|  874|Homo sapiens oncogenic protein-associa...    30   8.1  
BC009271-1|AAH09271.1|  585|Homo sapiens UBE3A protein protein.        30   8.1  
BC002582-1|AAH02582.2|  872|Homo sapiens ubiquitin protein ligas...    30   8.1  
AJ001108-1|CAA04535.1|  415|Homo sapiens E6-AP ubiquitin-protein...    30   8.1  
AF273050-1|AAG34910.1|  852|Homo sapiens CTCL tumor antigen se37...    30   8.1  
AF016708-1|AAB69154.1|  852|Homo sapiens E6-AP ubiquitin-protein...    30   8.1  
AB194232-2|BAD69554.1|  852|Homo sapiens ubiquitin ligase E3A is...    30   8.1  

>BC038507-1|AAH38507.2|  669|Homo sapiens GLS protein protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +1

Query: 250 PLCNNTAVSITSNDSPPFNNA---DPVMQLYNSVIVSDYKAAVKTTFQLEKE 396
           P+ N  A+ +TS      NNA   D VMQ  N +  ++Y      TFQ E+E
Sbjct: 332 PMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSNATFQSERE 383


>AF327434-1|AAG47842.1|  669|Homo sapiens glutaminase protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +1

Query: 250 PLCNNTAVSITSNDSPPFNNA---DPVMQLYNSVIVSDYKAAVKTTFQLEKE 396
           P+ N  A+ +TS      NNA   D VMQ  N +  ++Y      TFQ E+E
Sbjct: 332 PMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSNATFQSERE 383


>AF279697-1|AAG17700.1|  242|Homo sapiens glutaminase protein.
          Length = 242

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +1

Query: 250 PLCNNTAVSITSNDSPPFNNA---DPVMQLYNSVIVSDYKAAVKTTFQLEKE 396
           P+ N  A+ +TS      NNA   D VMQ  N +  ++Y      TFQ E+E
Sbjct: 108 PMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSNATFQSERE 159


>AF223943-1|AAF33825.1|  669|Homo sapiens glutaminase kidney isoform
           protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +1

Query: 250 PLCNNTAVSITSNDSPPFNNA---DPVMQLYNSVIVSDYKAAVKTTFQLEKE 396
           P+ N  A+ +TS      NNA   D VMQ  N +  ++Y      TFQ E+E
Sbjct: 332 PMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSNATFQSERE 383


>AF158555-1|AAD47056.1|  598|Homo sapiens glutaminase C protein.
          Length = 598

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +1

Query: 250 PLCNNTAVSITSNDSPPFNNA---DPVMQLYNSVIVSDYKAAVKTTFQLEKE 396
           P+ N  A+ +TS      NNA   D VMQ  N +  ++Y      TFQ E+E
Sbjct: 332 PMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSNATFQSERE 383


>AF097492-1|AAF00088.1|  527|Homo sapiens glutaminase isoform C
           protein.
          Length = 527

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +1

Query: 250 PLCNNTAVSITSNDSPPFNNA---DPVMQLYNSVIVSDYKAAVKTTFQLEKE 396
           P+ N  A+ +TS      NNA   D VMQ  N +  ++Y      TFQ E+E
Sbjct: 261 PMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSNATFQSERE 312


>AB020645-1|BAA74861.2|  677|Homo sapiens KIAA0838 protein protein.
          Length = 677

 Score = 31.1 bits (67), Expect = 3.5
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +1

Query: 250 PLCNNTAVSITSNDSPPFNNA---DPVMQLYNSVIVSDYKAAVKTTFQLEKE 396
           P+ N  A+ +TS      NNA   D VMQ  N +  ++Y      TFQ E+E
Sbjct: 340 PMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSNATFQSERE 391


>X98033-1|CAA66656.1|  852|Homo sapiens E6-AP protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 329 ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 366


>X98032-1|CAA66655.1|  852|Homo sapiens E6-AP protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 329 ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 366


>X98031-1|CAA66654.1|  852|Homo sapiens E6-AP protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 329 ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 366


>X98021-1|CAA66653.1|  852|Homo sapiens E6-AP protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 329 ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 366


>U84404-1|AAB49301.1|  852|Homo sapiens E6-associated protein
           E6-AP/ubiquitin-protein ligase protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 329 ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 366


>L07557-1|AAA35542.1|  874|Homo sapiens oncogenic protein-associated
           protein protein.
          Length = 874

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           L   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 351 LVNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 388


>BC009271-1|AAH09271.1|  585|Homo sapiens UBE3A protein protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 62  ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 99


>BC002582-1|AAH02582.2|  872|Homo sapiens ubiquitin protein ligase
           E3A (human papilloma virus E6-associated protein, Ange
           protein.
          Length = 872

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 349 ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 386


>AJ001108-1|CAA04535.1|  415|Homo sapiens E6-AP ubiquitin-protein
           ligase protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 228 ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 265


>AF273050-1|AAG34910.1|  852|Homo sapiens CTCL tumor antigen se37-2
           protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 329 ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 366


>AF016708-1|AAB69154.1|  852|Homo sapiens E6-AP ubiquitin-protein
           ligase protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 329 ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 366


>AB194232-2|BAD69554.1|  852|Homo sapiens ubiquitin ligase E3A
           isoform 1 protein.
          Length = 852

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 384 LKGSFNSSLVVTDDDAIV*LHYRVSIIKWRRVIGGNRD 271
           +   FNS  +V DDDAIV     + ++ +  V+GG  D
Sbjct: 329 ISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGGEVD 366


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,574,380
Number of Sequences: 237096
Number of extensions: 1250779
Number of successful extensions: 1983
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1983
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -