Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F05
(520 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 215 3e-57
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 142 4e-35
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 139 2e-34
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 117 9e-28
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 106 2e-24
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 106 2e-24
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 100 1e-22
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 33 0.019
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 31 0.078
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 28 0.96
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 27 1.7
SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase Ade2|Sc... 27 2.2
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 26 3.9
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 3.9
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 26 3.9
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 25 6.8
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 25 9.0
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 215 bits (525), Expect = 3e-57
Identities = 111/173 (64%), Positives = 134/173 (77%), Gaps = 1/173 (0%)
Frame = +1
Query: 4 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSV 183
+++Y+FSLTTFSP+GKLVQIEYAL AV AG TSVGIKA++GVV+ATE K S L S+
Sbjct: 2 TDKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASL 61
Query: 184 NKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQ-QYYLMYHEPIPTAQLVQRVATVMQEY 360
KV IT IGMVYSGMGPD+R+LV ++RK+AQ Y +Y+E PT LVQ +A+VMQE
Sbjct: 62 EKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQES 121
Query: 361 TQSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
TQSGGVRPFGVSLL+ G + P L+Q DPSG YFAWKATA+GK+ KTFL
Sbjct: 122 TQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFL 174
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 142 bits (343), Expect = 4e-35
Identities = 72/166 (43%), Positives = 103/166 (62%), Gaps = 2/166 (1%)
Frame = +1
Query: 4 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 180
S Y T FSP G+L Q+EYAL A+ G ++GI A +G+V+A E K S +L E S
Sbjct: 2 SRSYDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEES 61
Query: 181 VNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEY 360
K+ I ++ +G+ D +L+ AR++ QQY ++E +P QLV+RV + Q Y
Sbjct: 62 AEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY 121
Query: 361 TQSGGVRPFGVSLLICGWENDRPY-LFQCDPSGAYFAWKATAMGKN 495
TQ GG+RPFGVS L GW++ R Y LFQ +PSG Y +W+A ++G N
Sbjct: 122 TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGN 167
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 139 bits (337), Expect = 2e-34
Identities = 66/171 (38%), Positives = 107/171 (62%), Gaps = 2/171 (1%)
Frame = +1
Query: 13 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 192
Y +L+ FSP G+L+Q+EY AV G T++ ++ + +VI E K+ L + + K+
Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKI 63
Query: 193 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSG 372
M+ H+ + ++G+ D R+L+ +AR AQ + L +P+ L + VA V Q+YTQSG
Sbjct: 64 AMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSG 123
Query: 373 GVRPFGVSLLICGWE--NDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
GVRPFGVS LI G++ ++ P ++Q +P+G Y AWKATA+G+ + +L
Sbjct: 124 GVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYL 174
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 117 bits (282), Expect = 9e-28
Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 6/175 (3%)
Frame = +1
Query: 13 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 192
Y + TFSP G+L Q+EYA+ A+ G T++G+K + VV+ E + S L + HSV K+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKL 67
Query: 193 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSG 372
I HIG SG+ D R ++ AR Q + Y EP Q + + + +
Sbjct: 68 FEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGE 127
Query: 373 G------VRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
RPFGV+LLI G + P L+ +PSG YF ++A A+G K+ L
Sbjct: 128 DGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSEL 182
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 106 bits (255), Expect = 2e-24
Identities = 53/153 (34%), Positives = 82/153 (53%)
Frame = +1
Query: 34 FSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHI 213
FSP G+L Q EYA AV T +GIK +GV++A E S L N++ + HI
Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHI 73
Query: 214 GMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGV 393
G+ +G PD + +V +AR A + Y PIP + R+ +Q +T VRPFGV
Sbjct: 74 GIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGV 133
Query: 394 SLLICGWENDRPYLFQCDPSGAYFAWKATAMGK 492
+ ++++ P+L+ +P+G Y+ + A GK
Sbjct: 134 MSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGK 166
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 106 bits (254), Expect = 2e-24
Identities = 54/170 (31%), Positives = 89/170 (52%)
Frame = +1
Query: 10 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 189
+Y TT+SP G+L Q+EYAL A+ G +VG+ + V+ ++ L K
Sbjct: 5 QYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQK--K 62
Query: 190 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 369
+ I HIG+ +G+ PD R+L ++ A ++ PIP +L+ +VA Q TQ
Sbjct: 63 LIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQE 122
Query: 370 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
G RP+GV L+ G++ P+L + PSG + T+MG + +T++
Sbjct: 123 YGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYI 172
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 100 bits (240), Expect = 1e-22
Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Frame = +1
Query: 22 SLTTFSPSGKLVQIEYALAAVA-AGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEM 198
++T FSP G+L Q+EYA A AG TSVG+ N + ++ K L D +V V
Sbjct: 10 TITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFP 69
Query: 199 ITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGV 378
IT IG V +G D R V++AR A ++ P+P L +R+A + Q TQ +
Sbjct: 70 ITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAM 129
Query: 379 RPFGVSLLICGWEND-RPYLFQCDPSGAYFAWKATAMG 489
RP GV++ + +++ P LF+ DP+G Y +KAT+ G
Sbjct: 130 RPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAG 167
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 33.5 bits (73), Expect = 0.019
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +1
Query: 166 YDEHSVNKVEMITG----HIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQ 333
Y +H+VNK+++IT V D+ L T RK+ YY +Y P +L++
Sbjct: 1589 YSQHTVNKIQIITNITLDFDSFVLRTTVNDFLFLQTILRKIYNFYYALYDVPTTDVELLK 1648
Query: 334 R 336
R
Sbjct: 1649 R 1649
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 31.5 bits (68), Expect = 0.078
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -3
Query: 227 EYTIPIWPVIISTLLTLCSSYKMLLCLFSVAIT--TPLDA 114
++ +P+WP+++S LL + SY C+ +VAI+ T LDA
Sbjct: 1505 KHLLPLWPIVVSELLIIFKSY----CMPNVAISKETLLDA 1540
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 0.96
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 206 PVIISTLLTLCSSYKMLLCLFSVAITTPLDAFMPTEVPPAA 84
P +++T CSS L L + PL A +P + PP A
Sbjct: 265 PTLLNTYGNRCSSTDTLSSLSRLTSQDPLKASLPLQSPPLA 305
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -2
Query: 381 TDAS*LSIFLHDGRHSLDQLRCGYRLVVHQVVLLG--HFPGLCDEQTIIRAHAGVHHSYM 208
TD + +I +H G S + G ++ +G +P + + + +H G+ ++Y
Sbjct: 43 TDNASAAIDVHIGSQSNPRELLGLAHFCEHLLFMGTKKYPDENEYRKYLESHNGISNAYT 102
Query: 207 ASNHFNF 187
ASN+ N+
Sbjct: 103 ASNNTNY 109
>SPAC144.03 |ade2|min10, min3|adenylosuccinate synthetase
Ade2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 26.6 bits (56), Expect = 2.2
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +1
Query: 106 GIKASNGVVIATENKHKSILYDEH----SVNKVEMITGHIGMVYSGMGPDYRLLVTQARK 273
G+K + + I+ + H +++D H ++N+ E+ IG G+GP Y T+A +
Sbjct: 103 GLKCRDRIFIS-DRAH--LVFDYHQRADALNEAELGKQSIGTTGKGIGPAYS---TKATR 156
Query: 274 MAQQYYLMYHEPIPTAQLVQRVATVMQEY 360
+ + +YH A+ + VA + + Y
Sbjct: 157 SGIRVHHLYHWAEFEARYRKNVADLQKRY 185
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 25.8 bits (54), Expect = 3.9
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -3
Query: 209 WPVIISTLLTLCSSYKMLLCLFSVAITTP 123
WP+ I + T+ S+ +LC++ ++ P
Sbjct: 33 WPIRIRIINTIIISFMTMLCMYGSSVFMP 61
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 142 ENKHKSILYDEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARK 273
EN+ + + + N +E +T HI Y G G + T +RK
Sbjct: 21 ENRKEEVSTLQDMANDLEKLTDHIEATYIGRGVPHDHAKTGSRK 64
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.8 bits (54), Expect = 3.9
Identities = 7/34 (20%), Positives = 19/34 (55%)
Frame = -3
Query: 224 YTIPIWPVIISTLLTLCSSYKMLLCLFSVAITTP 123
+ I +W +++ L + ++ ++C+F V + P
Sbjct: 2241 FYIVLWALLLGVLAWISRTHSWIICVFGVGLGAP 2274
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 518 RNVFPLLKFFPIAVAFQAKYAPDGSH 441
RNV P+LK I Q Y PD H
Sbjct: 546 RNVPPILKRSSIGTPSQQAYFPDAPH 571
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 130 VIATENKHKSILYDEHSVNK 189
V T + K+I+YDE VNK
Sbjct: 271 VFTTNDWEKNIIYDESDVNK 290
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,214,724
Number of Sequences: 5004
Number of extensions: 47076
Number of successful extensions: 134
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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