Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F05
(520 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1) (... 250 6e-67
At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putativ... 249 1e-66
At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2) ... 149 1e-36
At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1) 148 2e-36
At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1) (... 146 6e-36
At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ... 122 1e-28
At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ... 119 1e-27
At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2) ... 119 1e-27
At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1) ... 119 1e-27
At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (... 118 3e-27
At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1) ... 113 9e-26
At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2) ... 113 9e-26
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 37 0.009
At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1) (P... 34 0.066
At2g27680.1 68415.m03354 aldo/keto reductase family protein cont... 31 0.47
At5g26200.1 68418.m03118 mitochondrial substrate carrier family ... 29 1.4
At4g35560.1 68417.m05053 expressed protein 28 3.3
At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic... 28 3.3
At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic... 28 4.3
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 27 5.7
At4g14290.1 68417.m02202 expressed protein contains Interpro ent... 27 5.7
At3g04370.1 68416.m00462 hypothetical protein contains Pfam prof... 27 5.7
At5g56850.2 68418.m07093 expressed protein 27 7.6
At5g56850.1 68418.m07094 expressed protein 27 7.6
At5g28490.1 68418.m03466 expressed protein contains Pfam profile... 27 7.6
At4g24350.1 68417.m03494 phosphorylase family protein contains P... 27 7.6
At1g27620.1 68414.m03373 transferase family protein similar to h... 27 7.6
>At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1)
(PRC3) identical to proteasome subunit alpha type 2
SP:O23708, GI:6093778; identical to cDNA proteasome
subunit prc3 GI:2511573
Length = 235
Score = 250 bits (611), Expect = 6e-67
Identities = 117/170 (68%), Positives = 143/170 (84%)
Frame = +1
Query: 10 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 189
+YSFSLTTFSPSGKLVQIE+AL AV +G TS+GIKASNGVVIATE K SIL DE SV K
Sbjct: 5 QYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQK 64
Query: 190 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 369
++ +T +IG+VYSGMGPD+R+LV ++RK A+QY +Y EPIP QLV+ ATVMQE+TQS
Sbjct: 65 IQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 124
Query: 370 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
GGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN +N KTFL
Sbjct: 125 GGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFL 174
>At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putative
nearly identical to SP|O23708 Proteasome subunit alpha
type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B)
{Arabidopsis thaliana} and to At1g16470
Length = 235
Score = 249 bits (609), Expect = 1e-66
Identities = 117/170 (68%), Positives = 142/170 (83%)
Frame = +1
Query: 10 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 189
+YSFSLTTFSPSGKLVQIE+AL AV +G TS+GIKASNGVVIATE K SIL DE SV K
Sbjct: 5 QYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQK 64
Query: 190 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 369
++ +T +IG VYSGMGPD+R+LV ++RK A+QY +Y EPIP QLV+ ATVMQE+TQS
Sbjct: 65 IQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 124
Query: 370 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
GGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN +N KTFL
Sbjct: 125 GGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFL 174
>At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2)
(PRS1) (PRC6) identical to SP|O24616 Proteasome subunit
alpha type 7-2 (EC 3.4.25.1) (20S proteasome alpha
subunit D2) {Arabidopsis thaliana}
Length = 250
Score = 149 bits (361), Expect = 1e-36
Identities = 72/172 (41%), Positives = 106/172 (61%), Gaps = 2/172 (1%)
Frame = +1
Query: 10 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 189
RY ++T FSP G L Q+EYAL AV G +VG++ ++ VV+A E K L D S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 190 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 369
+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQS
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 122
Query: 370 GGVRPFGVSLLICGWE--NDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
GGVRPFG+S LI G++ + P L+Q DPSG + AWKA A G+N N+ + FL
Sbjct: 123 GGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFL 174
>At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1)
Length = 250
Score = 148 bits (359), Expect = 2e-36
Identities = 72/172 (41%), Positives = 105/172 (61%), Gaps = 2/172 (1%)
Frame = +1
Query: 10 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 189
RY ++T FSP G L Q+EYAL AV G +VG++ ++ VV+A E K L D S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 190 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 369
+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQS
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 122
Query: 370 GGVRPFGVSLLICGWE--NDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
GGVRPFG+S LI G++ P L+Q DPSG + AWKA A G+N N+ + FL
Sbjct: 123 GGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFL 174
>At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1)
(PRC9) identical to GB:AAC32057 from [Arabidopsis
thaliana] (Genetics (1998) 149 (2), 677-692); identical
to cDNA proteasome subunit prc9 GI:2511583
Length = 250
Score = 146 bits (355), Expect = 6e-36
Identities = 73/174 (41%), Positives = 100/174 (57%), Gaps = 2/174 (1%)
Frame = +1
Query: 4 SERYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHS 180
S RY T FSP G+L Q+EYA+ A+ G+++GI + +GVV+ E K S +L S
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTS 61
Query: 181 VNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEY 360
K+ I H+ +G+ D +L+ AR AQ+Y MY EP+P QLVQ + Q Y
Sbjct: 62 AEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGY 121
Query: 361 TQSGGVRPFGVSLLICGWENDRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
TQ GG+RPFGVS L GW+ + L+ DPSG Y WKA A+G N ++ L
Sbjct: 122 TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSIL 175
>At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2)
identical to GB:AF043519
Length = 246
Score = 122 bits (294), Expect = 1e-28
Identities = 64/171 (37%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Frame = +1
Query: 13 YSFSLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 189
Y +T FSP G+L Q+EYA AV AAG TS+G++ + V + T+ K L D+ SV+
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSH 68
Query: 190 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 369
+ +T ++G++ +GM D R LV QAR A ++ Y +P L + +A Q YTQ
Sbjct: 69 LFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQH 128
Query: 370 GGVRPFGVSLLICGWENDR-PYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
+RP GV ++ G + +R P L++CDP+G ++ KAT+ G FL
Sbjct: 129 AYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFL 179
>At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1)
(PRC1) identical to proteasome subunit alpha type 6-1
SP:O81146 GI:12643647 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc1 GI:2511587
Length = 246
Score = 119 bits (287), Expect = 1e-27
Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 2/171 (1%)
Frame = +1
Query: 13 YSFSLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 189
Y +T FSP G+L Q+EYA AV AG TS+G++ + V + T+ K L D+ SV
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTH 68
Query: 190 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 369
+ IT +IG+V +G+ D R LV QAR A ++ Y +P L + +A Q YTQ
Sbjct: 69 LFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQH 128
Query: 370 GGVRPFGVSLLICGW-ENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
+RP GV ++ G E + P L++CDP+G ++ KAT+ G FL
Sbjct: 129 AYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFL 179
>At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2)
identical to 20S proteasome subunit PAE2 GB:AAC32061
from [Arabidopsis thaliana]
Length = 237
Score = 119 bits (286), Expect = 1e-27
Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Frame = +1
Query: 13 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 192
Y + TFSP G+L Q+EYA+ A+ G T++G+K GVV+A E + S L + SV K+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 193 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPI---PTAQLVQRVATVMQEYT 363
I HIG SG+ D R LV AR Q + Y EP+ T Q + +A E
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 364 QSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMG 489
+ RPFGVSLLI G + + P L+ DPSG ++ A A+G
Sbjct: 128 EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIG 169
>At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1)
identical to 20S proteasome subunit PAE1 GI:3421087 from
[Arabidopsis thaliana]
Length = 237
Score = 119 bits (286), Expect = 1e-27
Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Frame = +1
Query: 13 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 192
Y + TFSP G+L Q+EYA+ A+ G T++G+K GVV+A E + S L + SV K+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 193 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPI---PTAQLVQRVATVMQEYT 363
I HIG SG+ D R LV AR Q + Y EP+ T Q + +A E
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 364 QSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMG 489
+ RPFGVSLLI G + + P L+ DPSG ++ A A+G
Sbjct: 128 EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIG 169
>At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1)
(PRC8) identical to proteasome subunit alpha type 3
SP:O23715, GI:12644056 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc8 GI:2511591
Length = 249
Score = 118 bits (283), Expect = 3e-27
Identities = 59/167 (35%), Positives = 93/167 (55%)
Frame = +1
Query: 13 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 192
Y S+TTFSP G++ QIEYA AV GT VGIK +G+V+ E S + S ++
Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRI 67
Query: 193 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSG 372
+ H GM +G+ D R +V +A+ A+ Y +Y + +P +L +RVA+ + T
Sbjct: 68 HSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYW 127
Query: 373 GVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKT 513
+RPFG +++ G++ D P L+ +PSG + + A+GK KT
Sbjct: 128 WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKT 174
>At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1)
(gb|AAC32062.1)
Length = 278
Score = 113 bits (271), Expect = 9e-26
Identities = 60/170 (35%), Positives = 95/170 (55%)
Frame = +1
Query: 10 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 189
+Y +TT+SP+G+L Q+EYA+ AV G ++G+++ + VV+A NK +S L H K
Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL-SSHQ-RK 62
Query: 190 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 369
+ + HIG+ +G+ D R+L R + + Y P+P +LV +A Q TQ
Sbjct: 63 IFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQR 122
Query: 370 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
RP+GV LL+ G + +L+ PSG YF ++A A+G KT+L
Sbjct: 123 SWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYL 172
>At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2)
(PRC2B) (PRS1) identical to GB:AAC32063 from
[Arabidopsis thaliana] (Genetics 149 (2), 677-692
(1998)); identical to cDNA proteasome subunit prc2b
GI:2511585
Length = 277
Score = 113 bits (271), Expect = 9e-26
Identities = 60/170 (35%), Positives = 95/170 (55%)
Frame = +1
Query: 10 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 189
+Y +TT+SP+G+L Q+EYA+ AV G ++G+++ + VV+A NK +S L H K
Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL-SSHQ-RK 62
Query: 190 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 369
+ + HIG+ +G+ D R+L R + + Y P+P +LV +A Q TQ
Sbjct: 63 IFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQR 122
Query: 370 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
RP+GV LL+ G + +L+ PSG YF ++A A+G KT+L
Sbjct: 123 SWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYL 172
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 36.7 bits (81), Expect = 0.009
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 250 LLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWENDRP 429
+LV +A+ ++ E T++L+Q +++ + Y V + + GW+ +
Sbjct: 312 MLVLPLEFLAKDGVVLVGEKKVTSKLLQTSSSMEKMYKIDDHV-----ACAVAGWDRNHG 366
Query: 430 Y-LFQCDPSGAYFAWKATAMGKNFNNGKTFL 519
+ L+ DPSG Y W+A A+G N ++ L
Sbjct: 367 FQLYMSDPSGNYGGWQAAAVGANNQAAQSIL 397
>At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1)
(PRCD) identical to cDNA proteasome subunit prcd
GI:2511593
Length = 233
Score = 33.9 bits (74), Expect = 0.066
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Frame = +1
Query: 91 GGTSVGIKASNGVVIATENKHKSILY-DEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQA 267
G T +G+ + GVV+ +++ + +Y + +K+ +T ++ + SG D +++
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 268 RKMAQQYYLMYHEPIP---TAQLVQRVATVMQEYTQSG 372
R Q+ + + +P +A L++ +A + Q+G
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTG 109
>At2g27680.1 68415.m03354 aldo/keto reductase family protein
contains Pfam profile PF00248: oxidoreductase, aldo/keto
reductase family
Length = 384
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 55 VQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMIT 204
V + Y L GG+ +G++ I N S++ DE VN ++ +T
Sbjct: 315 VAVRYVLDQQGVGGSMIGVRLGLAEHIQDANAIFSLVLDEEDVNSIQEVT 364
>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 29.5 bits (63), Expect = 1.4
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = +1
Query: 10 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSV------GIKASNGVVIATENKHKSILYD 171
RY S +G V ++ AA A+G +++ IK V+ A EN + +
Sbjct: 233 RYKHSYNHKEDAGGSVVVQALSAATASGCSALVTMPVDTIKTRLQVLDAEENGRRRAMTV 292
Query: 172 EHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQY 288
SV + M G +G Y G+GP + + A M Y
Sbjct: 293 MQSVKSL-MKEGGVGACYRGLGPRWVSMSMSATTMITTY 330
>At4g35560.1 68417.m05053 expressed protein
Length = 917
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 43 SGKLVQIEYALAAVAAGGTSVGIKASNGVVI 135
S +++Q+EY + +A+ G+ V + SNG ++
Sbjct: 76 SNQVIQLEYTIPYLASNGSRVSVGYSNGDIL 106
>At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 405
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +3
Query: 243 LSSARHTSQENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRRRPSFRRFVTDLRLGER 422
LS+ + ++E P VL V RA+ A S D+ + P F + T L LG+
Sbjct: 34 LSAGTYRTEEGKPLVLDVVRRAEQQLA-NDLSRDKE--YLPLNGLPEFNKLSTKLILGDD 90
Query: 423 SPLL 434
SP L
Sbjct: 91 SPAL 94
>At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 403
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +3
Query: 243 LSSARHTSQENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRRRPSFRRFVTDLRLGER 422
LS+ + ++E P VL V RA+ A D + P F + T L LG+
Sbjct: 34 LSAGTYRTEEGKPLVLDVVRRAEQQLA-----NDLDKEYLPLNGLPEFNKLSTKLILGDD 88
Query: 423 SPLL 434
SP L
Sbjct: 89 SPAL 92
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 27.5 bits (58), Expect = 5.7
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 195 NDYWPYRNGVLRHGP*LSSARHTSQENGPTVLPDVPRADTH-SAVGPASGDRHARI-YSI 368
+DY YRN GP A S E P L R D H PA+ +R A + + I
Sbjct: 698 DDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEI 757
Query: 369 RRR 377
++R
Sbjct: 758 QKR 760
>At4g14290.1 68417.m02202 expressed protein contains Interpro entry
IPR000379
Length = 534
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 261 TSQENGP--TVLPDVPRADTHSAVGPASGDRHARIYSIRRRPS 383
TS+ N T P++ +DT SA GP + AR+ S+ PS
Sbjct: 473 TSEGNAAASTTEPELALSDTDSASGPTPCNHDARLSSVASVPS 515
>At3g04370.1 68416.m00462 hypothetical protein contains Pfam profile
PF01657: Domain of unknown function
Length = 332
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 439 QCDPSGAYFAWKATAMGKNFNNGKTFL 519
QCDP A KAT N++N FL
Sbjct: 38 QCDPLDANILQKATTKSPNYSNQNLFL 64
>At5g56850.2 68418.m07093 expressed protein
Length = 413
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 448 DRTGISKGDRSPNRRSVTKRRKDGRL 371
+ TG+SK +R P R+S+ + D L
Sbjct: 139 EETGLSKPERKPKRKSMRRSMSDSNL 164
>At5g56850.1 68418.m07094 expressed protein
Length = 551
Score = 27.1 bits (57), Expect = 7.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 448 DRTGISKGDRSPNRRSVTKRRKDGRL 371
+ TG+SK +R P R+S+ + D L
Sbjct: 277 EETGLSKPERKPKRKSMRRSMSDSNL 302
>At5g28490.1 68418.m03466 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 190
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +2
Query: 257 SHKPGKWPNSTT*CT---TSRYPQRSWSSEWRPSCKNILN 367
SH+P K PNS+T T +SRY + +W C+ + N
Sbjct: 5 SHQPNKNPNSSTQLTPPSSSRYENQK-RRDWNTFCQYLRN 43
>At4g24350.1 68417.m03494 phosphorylase family protein contains Pfam
PF01048: Phosphorylase family
Length = 336
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +1
Query: 103 VGIKASNGVVIATENKHKSILYDEHSVNKVEMITGHIGMVYSGMG 237
VG+KA+ + +++ LYD V+ +M + + M + G
Sbjct: 246 VGLKAATAYIFVDNAAYRNFLYDTFGVSSSDMESSAVAMTCASNG 290
>At1g27620.1 68414.m03373 transferase family protein similar to
hypersensitivity-related gene product HSR201 - Nicotiana
tabacum, EMBL:X95343; contains Pfam transferase family
domain PF00248
Length = 442
Score = 27.1 bits (57), Expect = 7.6
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Frame = +3
Query: 267 QENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRRRPSFRRFVTDLRLGER-SPLLIPV 443
+EN PT++ + HS D H +SI+ F++ ++ L L + S +L+
Sbjct: 10 EENQPTLITPLSPTPNHSLYLSNLDDHHFLRFSIKYLYLFQKSISPLTLKDSLSRVLVDY 69
Query: 444 RS-VGRV------LRLEGDCDGE 491
GR+ +LE DC+GE
Sbjct: 70 YPFAGRIRVSDEGSKLEVDCNGE 92
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,723,403
Number of Sequences: 28952
Number of extensions: 255104
Number of successful extensions: 736
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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