Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0002_F04
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 44 5e-05
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 44 5e-05
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 44 5e-05
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 44 5e-05
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 44 5e-05
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 44 5e-05
AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine re... 31 0.41
U21308-9|AAW57822.1| 787|Caenorhabditis elegans Nfi (nuclear fa... 30 0.95
U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear fa... 30 0.95
U21308-7|AAW57823.1| 823|Caenorhabditis elegans Nfi (nuclear fa... 30 0.95
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 44.4 bits (100), Expect = 5e-05
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = +2
Query: 173 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 346
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 347 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTT 526
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+ +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 527 SDLD 538
++
Sbjct: 148 DSIN 151
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 44.4 bits (100), Expect = 5e-05
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = +2
Query: 173 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 346
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 347 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTT 526
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+ +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 527 SDLD 538
++
Sbjct: 148 DSIN 151
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 44.4 bits (100), Expect = 5e-05
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = +2
Query: 173 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 346
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 347 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTT 526
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+ +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 527 SDLD 538
++
Sbjct: 148 DSIN 151
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 44.4 bits (100), Expect = 5e-05
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = +2
Query: 173 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 346
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 347 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTT 526
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+ +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 527 SDLD 538
++
Sbjct: 148 DSIN 151
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 44.4 bits (100), Expect = 5e-05
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = +2
Query: 173 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 346
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 347 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTT 526
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+ +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 527 SDLD 538
++
Sbjct: 148 DSIN 151
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 44.4 bits (100), Expect = 5e-05
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = +2
Query: 173 SGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRKYFNILKEIGENDGGV-LKLS 346
S LS +S + + A ET ++I L + + + NI + + G +KL+
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 347 GAIFTDLKMSVYEQFKQDVQMTGVSKVNELPWDNNTATATAINDFVRLATHEAIDEIVTT 526
+FT + + + DV+ + + L +DN ATA AIN+FVR T + I +I+ +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 527 SDLD 538
++
Sbjct: 148 DSIN 151
>AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein266 protein.
Length = 327
Score = 31.5 bits (68), Expect = 0.41
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -1
Query: 339 FKTPPSFSPISFKILKYFLLKHECGWSLNTTLISFRVSSVAPNDSADIIVHADSP-DVTK 163
F+TP + + + ++ + C W L I + + I+ + D P D+
Sbjct: 31 FQTPKTMGSVKYVMMNFHAWCILCDWMLAVMTIPYLLFPAMVGFPLGILKYFDVPIDIQV 90
Query: 162 WLSVFRLTRVTSSSVKLYNDLFKNV*AQKS 73
+L +T V SS V ++ + + + AQK+
Sbjct: 91 YLVAVGITAVYSSIVLIFENRYYMMFAQKT 120
>U21308-9|AAW57822.1| 787|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform b protein.
Length = 787
Score = 30.3 bits (65), Expect = 0.95
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 113 NFTDELVTRVNRKTESHFVTSGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRK 289
N D V V+ + H + A I++ALS T ++ E V R+HPH+ + +
Sbjct: 446 NHGDVGVVVVDERNREHVI----HAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFE 501
Query: 290 YFNILKEIGENDGGV 334
+ N +E+ +N+G +
Sbjct: 502 FLNCNQEMNKNEGAL 516
>U21308-8|AAN60509.2| 807|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform a protein.
Length = 807
Score = 30.3 bits (65), Expect = 0.95
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 113 NFTDELVTRVNRKTESHFVTSGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRK 289
N D V V+ + H + A I++ALS T ++ E V R+HPH+ + +
Sbjct: 466 NHGDVGVVVVDERNREHVI----HAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFE 521
Query: 290 YFNILKEIGENDGGV 334
+ N +E+ +N+G +
Sbjct: 522 FLNCNQEMNKNEGAL 536
>U21308-7|AAW57823.1| 823|Caenorhabditis elegans Nfi (nuclear
factor i) family protein1, isoform c protein.
Length = 823
Score = 30.3 bits (65), Expect = 0.95
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 113 NFTDELVTRVNRKTESHFVTSGLSAWTIISALSLGATDETLNEINVVL-RLHPHSCFNRK 289
N D V V+ + H + A I++ALS T ++ E V R+HPH+ + +
Sbjct: 482 NHGDVGVVVVDERNREHVI----HAQHIVNALSSLRTTPSMRESPVGRKRMHPHTSNSFE 537
Query: 290 YFNILKEIGENDGGV 334
+ N +E+ +N+G +
Sbjct: 538 FLNCNQEMNKNEGAL 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,540,211
Number of Sequences: 27780
Number of extensions: 225779
Number of successful extensions: 599
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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