Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F04
         (549 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g14070.1 68417.m02172 AMP-binding protein, putative similar t...    29   1.5  
At1g11410.1 68414.m01311 S-locus protein kinase, putative simila...    29   2.0  
At4g08390.2 68417.m01386 L-ascorbate peroxidase, stromal (sAPX) ...    28   3.6  
At4g08390.1 68417.m01385 L-ascorbate peroxidase, stromal (sAPX) ...    28   3.6  
At4g35560.1 68417.m05053 expressed protein                             28   4.7  
At4g00760.1 68417.m00106 two-component responsive regulator fami...    28   4.7  
At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein...    27   6.2  
At1g77490.1 68414.m09024 L-ascorbate peroxidase, thylakoid-bound...    27   6.2  
At3g52820.1 68416.m05820 purple acid phosphatase (PAP22) identic...    27   8.3  

>At4g14070.1 68417.m02172 AMP-binding protein, putative similar to
           AMP-binding protein [gi:1617272] from Brassica napus;
           contains Pfam AMP-binding enzyme domain PF00501;
           identical to cDNA acyl-CoA synthetase-like protein
           GI:20799730
          Length = 727

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 462 AVAVLLSQGNSLTLDTPVICTSCLNCS 382
           A+ V+L  G  LT  +PV+C   L+C+
Sbjct: 487 AIGVILQNGYGLTETSPVVCARTLSCN 513


>At1g11410.1 68414.m01311 S-locus protein kinase, putative similar
           to receptor-like protein kinase [Arabidopsis thaliana]
           gi|4008008|gb|AAC95352; contains S-locus glycoprotein
           family domain, Pfam:PF00954
          Length = 840

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -1

Query: 378 TLIFKSVNIAPESFKTPPSFSPISFKILKYFLLKHECGWSLNTTLISFRVSSVA 217
           +L+FK         K P SF+P SF +   F+L+     S +  L  F +S++A
Sbjct: 459 SLLFKEAKTTNTLRKAPSSFAPSSFDLEDSFILEELEDKSRSRELPLFELSTIA 512


>At4g08390.2 68417.m01386 L-ascorbate peroxidase, stromal (sAPX)
           identical to stromal ascorbate peroxidase [Arabidopsis
           thaliana] gi|1419388|emb|CAA67425
          Length = 372

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 278 FNRKYFNILKEIGENDGGVLKLSGAIFTDLKMSVY-EQFKQD 400
           F+  YF  +KE  + D  VL    AIF D    VY E++  D
Sbjct: 301 FDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAAD 342


>At4g08390.1 68417.m01385 L-ascorbate peroxidase, stromal (sAPX)
           identical to stromal ascorbate peroxidase [Arabidopsis
           thaliana] gi|1419388|emb|CAA67425
          Length = 372

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 278 FNRKYFNILKEIGENDGGVLKLSGAIFTDLKMSVY-EQFKQD 400
           F+  YF  +KE  + D  VL    AIF D    VY E++  D
Sbjct: 301 FDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAAD 342


>At4g35560.1 68417.m05053 expressed protein 
          Length = 917

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = +2

Query: 326 GGVLKLSGAIFTDLKMSVYEQFKQDVQ-MTGVSKVNELPWDNNTATATAINDFVRLATHE 502
           G V K      TD +    E  K+ ++ ++ +      PW+NN   +  IN   R+   E
Sbjct: 719 GSVFKTKSKRTTDTEP---ESSKETIEELSKIFSTANFPWNNNVENSREINTITRVEDEE 775

Query: 503 AID 511
            +D
Sbjct: 776 ELD 778


>At4g00760.1 68417.m00106 two-component responsive regulator family
           protein / response regulator family protein contains
           Pfam profile: PF00072 response regulator receiver domain
          Length = 367

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +2

Query: 338 KLSGAIFTDLKMSVYEQFKQDVQMTGVSK-VNELPWDNNTATATAINDFVRLATHEAIDE 514
           K S   F DL  SV  + +  ++  G S   +E+P     ++   +   +++ THEA+DE
Sbjct: 268 KWSAESFIDLTASVENESQDPLESVGDSVGPHEIPLSPPESSNNNVAAQLQMPTHEALDE 327

Query: 515 IVTTSDL 535
            V    L
Sbjct: 328 EVMQDGL 334


>At3g22760.1 68416.m02870 CXC domain containing TSO1-like protein 1
           (SOL1) identical to CXC domain containing TSO1-like
           protein 1 (SOL1) [Arabidopsis thaliana] GI:7767427;
           contains Pfam profile PF03638: Tesmin/TSO1-like CXC
           domain; supporting cDNA
           gi|7767426|gb|AF205142.1|AF205142
          Length = 609

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 258 LNTTLISFRVSSVAPNDSADIIVHADSPDVTKW 160
           ++  LI   +++++PN     + H DSP+ T W
Sbjct: 554 MSENLIHSPITTLSPNSKRVSLSHLDSPESTPW 586


>At1g77490.1 68414.m09024 L-ascorbate peroxidase, thylakoid-bound
           (tAPX) identical to thylakoid-bound ascorbate peroxidase
           GB:CAA67426 [Arabidopsis thaliana]
          Length = 426

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 278 FNRKYFNILKEIGENDGGVLKLSGAIFTDLKMSVY-EQFKQDV 403
           F+  YF  +KE  ++D  VL    A+F D     Y E++ +DV
Sbjct: 280 FDNSYFKDIKEKRDDDLLVLPTDAALFEDPSFKNYAEKYAEDV 322


>At3g52820.1 68416.m05820 purple acid phosphatase (PAP22) identical
           to purple acid phosphatase (PAP22)GI:20257494 from
           [Arabidopsis thaliana]
          Length = 434

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 393 LNCS*TLIFKSVNIAPE-SFKTPPSFSPISFKIL 295
           L  + T  ++     PE SFKTPPS  P+ F I+
Sbjct: 113 LQANTTYYYRCGGNGPEFSFKTPPSTFPVEFAIV 146


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,697,184
Number of Sequences: 28952
Number of extensions: 204299
Number of successful extensions: 553
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)