SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F03
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   1.9  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   1.9  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   3.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.4  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   4.5  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   7.9  

>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 137 ECVPENLELKKKVFQNLDN 193
           +C PE  ELKK + + L N
Sbjct: 52  KCTPEGEELKKDIPEALQN 70


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 137 ECVPENLELKKKVFQNLDN 193
           +C PE  ELKK + + L N
Sbjct: 52  KCTPEGEELKKDIPEALQN 70


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 137 ECVPENLELKKKVFQNLDN 193
           +C PE  ELKK +   L N
Sbjct: 51  KCTPEGEELKKDIPDALQN 69


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -1

Query: 379 SCFLSHFWFCPRR-WNYLYKWHVVWWINWM 293
           S FL+    C    W  LY+W V++ ++ M
Sbjct: 147 SFFLNFMLHCNNTTWRCLYRWIVLYTLSKM 176


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 137 ECVPENLELKKKVFQNLDN 193
           +C PE  ELK+ + + L N
Sbjct: 52  KCTPEGEELKRDIPEALQN 70


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 100 ITGTFHTLELFIRHLDFPLGVHLSL 26
           ITG+ + L L +   + P G+H SL
Sbjct: 48  ITGSENCLVLNVYTRNIPDGIHTSL 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,798
Number of Sequences: 336
Number of extensions: 2289
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

- SilkBase 1999-2023 -