Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0002_F03
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    48   5e-08
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            27   0.14 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   1.3  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   1.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.3  

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 48.0 bits (109), Expect = 5e-08
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +2

Query: 416 LSREIDGFVLNRIQYAILGEVWRL 487
           L+REIDGFVLNRIQYAIL E WRL
Sbjct: 1   LTREIDGFVLNRIQYAILNEAWRL 24


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 406 LLAYFFHDSSCFLSHFWFCPRRWNYLY 326
           +L+   HD+ C  S+ W C  RW  +Y
Sbjct: 364 ILSPSIHDNIC--SNGWICEHRWRQIY 388


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -2

Query: 273 LCFIFSENSDGNVVLVELDKIVLSSTTLSKFWNTFFLSSKFSGTHSCTKI 124
           L F++ E     VV      + L   TL KF+  +  S   +G +SC K+
Sbjct: 188 LVFLWKEGDPVQVV----KNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKV 233


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -2

Query: 273 LCFIFSENSDGNVVLVELDKIVLSSTTLSKFWNTFFLSSKFSGTHSCTKI 124
           L F++ E     VV      + L   TL KF+  +  S   +G +SC K+
Sbjct: 188 LVFLWKEGDPVQVV----KNLHLPRFTLEKFFTDYCNSKTNTGEYSCLKV 233


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 287  VSHPVNPPYYVPLVEIVPAPWTKPEVTKKTRA 382
            VS+ V P     ++++VPA W    VT    A
Sbjct: 1509 VSNNVKPGGNFVVLDLVPATWYHLRVTAHNNA 1540


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +2

Query: 257 ENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTK 370
           +N++    +  ++P NP  ++  +E +      PE+T+
Sbjct: 165 QNLEELRDLKETYPFNPVLFISSLENISLNGIDPELTE 202


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +2

Query: 257 ENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTK 370
           +N++    +  ++P NP  ++  +E +      PE+T+
Sbjct: 203 QNLEELRDLKETYPFNPVLFISSLENISLNGIDPELTE 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,833
Number of Sequences: 438
Number of extensions: 2741
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)